Curated BLAST for Genomes

 

Curated BLAST

Searching in Cronobacter condimenti 1330 (GCF_000319285.1)

Found 134 curated entries in PaperBLAST's database that match '3.2.1.28' as complete word(s).

These curated entries have 79 distinct sequences.

Running ublast with E ≤ 0.01

Found 9 relevant proteins in Cronobacter condimenti 1330, or try another query

BN137_RS11100 BN137_1769 WP_032984355.1: alpha,alpha-trehalase
is similar to:
PaperBLAST

TREF_ECOLI / P62601: Cytoplasmic trehalase; Alpha,alpha-trehalase; Alpha,alpha-trehalose glucohydrolase; EC 3.2.1.28 from Escherichia coli
TreF / b3519: cytoplasmic trehalase (EC 3.2.1.28) from Escherichia coli
AAC76544.1: trehalase (TreF;b3519) (EC 3.2.1.28)
treF / P62601: cytoplasmic trehalase (EC 3.2.1.28) from Escherichia coli

74% id,
100% cov

D4I261: alpha,alpha-trehalase (EC 3.2.1.28) from Erwinia amylovora

62% id,
95% cov

AO356_24205: Alpha,alpha-trehalase (EC 3.2.1.28) from Pseudomonas fluorescens

52% id,
92% cov

More...

treA BN137_RS20560 WP_226991942.1: alpha,alpha-trehalase TreA
is similar to:
PaperBLAST

TREA_ECOLI / P13482: Periplasmic trehalase; Alpha,alpha-trehalase; Alpha,alpha-trehalose glucohydrolase; Tre37A; EC 3.2.1.28 from Escherichia coli
Tre / b1197: periplasmic trehalase (EC 3.2.1.28) from Escherichia coli
AAC74281.1: α,α-trehalase (periplasmic) (TreA;OsmA) (Tre37A) (EC 3.2.1.28)
treA / P13482: periplasmic trehalase (EC 3.2.1.28) from Escherichia coli

76% id,
96% cov

AO356_24205: Alpha,alpha-trehalase (EC 3.2.1.28) from Pseudomonas fluorescens

56% id,
96% cov

Q3BXX2: alpha,alpha-trehalase (EC 3.2.1.28) from Xanthomonas campestris

56% id,
96% cov

More...

BN137_RS16150 BN137_592 WP_007665535.1: alpha-glucosidase
is similar to:
PaperBLAST

AAS80455.1: α,α-trehalase / α-glucosidase (TTC0107) (EC 3.2.1.20|3.2.1.28)

42% id,
97% cov

Dshi_1649: alpha-glucosidase / maltase / trehalase / sucrase (EC 3.2.1.48; EC 3.2.1.20; EC 3.2.1.28) from Dinoroseobacter shibae

38% id,
89% cov

BN137_RS16145 BN137_593 WP_007665537.1: alpha-glucosidase
is similar to:
PaperBLAST

AAS80455.1: α,α-trehalase / α-glucosidase (TTC0107) (EC 3.2.1.20|3.2.1.28)

39% id,
100% cov

Dshi_1649: alpha-glucosidase / maltase / trehalase / sucrase (EC 3.2.1.48; EC 3.2.1.20; EC 3.2.1.28) from Dinoroseobacter shibae

49% id,
37% cov

treC BN137_RS04085 BN137_3397 WP_007678620.1: alpha,alpha-phosphotrehalase
is similar to:
PaperBLAST

AAS80455.1: α,α-trehalase / α-glucosidase (TTC0107) (EC 3.2.1.20|3.2.1.28)

38% id,
99% cov

Dshi_1649: alpha-glucosidase / maltase / trehalase / sucrase (EC 3.2.1.48; EC 3.2.1.20; EC 3.2.1.28) from Dinoroseobacter shibae

33% id,
97% cov

BN137_RS02360 BN137_3799 WP_007680128.1: glycoside hydrolase family 15 protein
is similar to:
PaperBLAST

TREH_THEAC / Q9HLE2: Trehalase; Alpha,alpha-trehalase; EC 3.2.1.28 from Thermoplasma acidophilum

31% id,
98% cov

TREH_THEVO / Q978S7: Trehalase; Alpha,alpha-trehalase; EC 3.2.1.28 from Thermoplasma volcanium

30% id,
94% cov

TREH_MYCS2 / A0R0W9: Trehalase; Alpha,alpha-trehalase; Alpha,alpha-trehalose glucohydrolase; EC 3.2.1.28 from Mycolicibacterium smegmatis
ABK72415.1: α,α-trehalase (MSMEG_4535;MSMEG4528) (EC 3.2.1.28)

30% id,
92% cov

More...

BN137_RS07360 BN137_2643 WP_007675516.1: glycoside hydrolase family 65 protein
is similar to:
PaperBLAST

ATC1_CANAL / Q5AAU5: Cell wall acid trehalase ATC1; Alpha,alpha-trehalase; Alpha,alpha-trehalose glucohydrolase; EC 3.2.1.28 from Candida albicans
Q5AAU5: alpha,alpha-trehalase (EC 3.2.1.28) from Candida albicans

21% id,
42% cov

ATH1_CANGB / M1RNJ8: Periplasmic/secreted acid trehalase ATH1; cgATH1; EC 3.2.1.28 from Candida glabrata
AGG12634.1: acid trehalase (Ath1;CgATH1;CAGLOK05137g) (EC 3.2.1.28)

20% id,
42% cov

ATH1_YEASC / N1P212: Periplasmic acid trehalase ATC1; EC 3.2.1.28 from Saccharomyces cerevisiae
ATH1_YEAST / P48016: Periplasmic acid trehalase ATH1; Alpha,alpha-trehalase; Alpha,alpha-trehalose glucohydrolase; EC 3.2.1.28 from Saccharomyces cerevisiae
CAA89280.1: acid trehalase (vacuolar) (Ath1;YPR026w;YP9367.06) (EC 3.2.1.28)
ATH1 / P48016: periplasmic/vacuolar trehalase (EC 3.2.1.28) from Saccharomyces cerevisiae
P48016: alpha,alpha-trehalase (EC 3.2.1.28) from Saccharomyces cerevisiae

25% id,
26% cov

More...

BN137_RS01895 BN137_3905 WP_007680717.1: alpha-amylase
is similar to:
PaperBLAST

AAS80455.1: α,α-trehalase / α-glucosidase (TTC0107) (EC 3.2.1.20|3.2.1.28)

28% id,
26% cov

Dshi_1649: alpha-glucosidase / maltase / trehalase / sucrase (EC 3.2.1.48; EC 3.2.1.20; EC 3.2.1.28) from Dinoroseobacter shibae

27% id,
18% cov

malZ BN137_RS02665 BN137_3729 WP_007679963.1: maltodextrin glucosidase
is similar to:
PaperBLAST

AAS80455.1: α,α-trehalase / α-glucosidase (TTC0107) (EC 3.2.1.20|3.2.1.28)

35% id,
13% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 10 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory