Curated BLAST for Genomes

 

Curated BLAST

Searching in Cronobacter condimenti 1330 (GCF_000319285.1)

Found 15 curated entries in PaperBLAST's database that match '4.1.2.14' as complete word(s).

These curated entries have 12 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Cronobacter condimenti 1330, or try another query

BN137_RS04830 BN137_3228 WP_007677914.1: bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase
is similar to:
PaperBLAST

ALKH_ECOLI / P0A955: KHG/KDPG aldolase; EC 4.1.3.16; EC 4.1.2.14 from Escherichia coli
Kga / b1850: KHG/KDPG aldolase (EC 4.1.2.55; EC 4.1.2.14; EC 4.1.3.42; EC 4.1.1.112) from Escherichia coli
eda / RF|NP_416364: KHG/KDPG aldolase; EC 4.1.2.14; EC 4.1.3.16 from Escherichia coli

92% id,
100% cov

ALKD_PSEA6 / Q15X88: 2-dehydro-3-deoxy-phosphogluconate aldolase; 2-keto-3-deoxy-6-phospho-D-gluconate aldolase; KDPG aldolase; EC 4.1.2.14 from Pseudoalteromonas atlantica

67% id,
98% cov

Q00384: 2-dehydro-3-deoxy-phosphogluconate aldolase (EC 4.1.2.14) from Zymomonas mobilis

53% id,
94% cov

More...

BN137_RS04055 BN137_3403 WP_007678627.1: KDGP aldolase family protein
is similar to:
PaperBLAST

DGAF_SALT1 / D0ZLR2: 2-dehydro-3-deoxy-phosphogluconate aldolase; Keto-3-deoxygluconate 6-phosphate aldolase; KDGP aldolase; EC 4.1.2.14 from Salmonella typhimurium

50% id,
98% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory