Searching in Cronobacter condimenti 1330 (GCF_000319285.1)
Found 15 curated entries in PaperBLAST's database that match '4.1.2.55' as complete word(s).
These curated entries have 9 distinct sequences.
Running ublast with E ≤ 0.01
Found 2 relevant proteins in Cronobacter condimenti 1330, or try another query
| BN137_RS04830 BN137_3228 WP_007677914.1: bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase is similar to: | PaperBLAST |
Kga / b1850: KHG/KDPG aldolase (EC 4.1.2.55; EC 4.1.2.14; EC 4.1.3.42; EC 4.1.1.112) from Escherichia coli | 92% id, 100% cov |
kdgA / P38448: 2-dehydro-3-deoxy-D-gluconate-6-phosphate aldolase (EC 4.1.2.55) from Dickeya dadantii | 86% id, 99% cov |
TM0066 / Q9WXS1: 4-hydroxy-2-oxoglutarate aldolase (EC 4.1.3.16; EC 4.1.2.55) from Thermotoga maritima | 36% id, 95% cov |
| BN137_RS04055 BN137_3403 WP_007678627.1: KDGP aldolase family protein is similar to: | PaperBLAST |
dgaF / D0ZLR2: 2-dehydro-3-deoxy-phosphogluconate aldolase (EC 4.1.2.55) from Salmonella typhimurium | 50% id, 98% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 4 reading frames. Except for 2 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
| 16450-16788 (frame +1) on NZ_CAKW01000090.1 Cronobacter condimenti 1330, whole genome shotgun sequence is similar to: | PaperBLAST |
YidU / b4477: 2-dehydro-3-deoxy-6-phosphogalactonate aldolase (EC 4.1.2.55; EC 4.1.2.21) from Escherichia coli | 89% id, 49% cov |
TM0066 / Q9WXS1: 4-hydroxy-2-oxoglutarate aldolase (EC 4.1.3.16; EC 4.1.2.55) from Thermotoga maritima | 36% id, 48% cov |
| 16163-16546 (frame +2) on NZ_CAKW01000090.1 Cronobacter condimenti 1330, whole genome shotgun sequence is similar to: | PaperBLAST |
YidU / b4477: 2-dehydro-3-deoxy-6-phosphogalactonate aldolase (EC 4.1.2.55; EC 4.1.2.21) from Escherichia coli | 77% id, 53% cov |
Lawrence Berkeley National Laboratory