Curated BLAST for Genomes

 

Curated BLAST

Searching in Salinicoccus carnicancri Crm (GCF_000330705.1)

Found 24 curated entries in PaperBLAST's database that match '1.1.1.17' as complete word(s).

These curated entries have 19 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Salinicoccus carnicancri Crm, or try another query

C792_RS0111860 WP_017549670.1: mannitol-1-phosphate 5-dehydrogenase
is similar to:
PaperBLAST

A8YYC5: mannitol-1-phosphate 5-dehydrogenase (EC 1.1.1.17) from Staphylococcus aureus

55% id,
99% cov

I3E3X0: mannitol-1-phosphate 5-dehydrogenase (EC 1.1.1.17) from Bacillus methanolicus

43% id,
95% cov

MTLD_ECOLI / P09424: Mannitol-1-phosphate 5-dehydrogenase; EC 1.1.1.17 from Escherichia coli
MtlD / b3600: mannitol-1-phosphate 5-dehydrogenase (EC 1.1.1.17) from Escherichia coli
mtlD / P09424: mannitol-1-phosphate 5-dehydrogenase (EC 1.1.1.17) from Escherichia coli
P09424: mannitol-1-phosphate 5-dehydrogenase (EC 1.1.1.17) from Escherichia coli

42% id,
97% cov

More...

C792_RS0104940 WP_017548342.1: HAD-IA family hydrolase
is similar to:
PaperBLAST

Q6FBP5: mannitol-1-phosphate 5-dehydrogenase (EC 1.1.1.17); mannitol-1-phosphatase (EC 3.1.3.22) from Acinetobacter baylyi

25% id,
26% cov

D0C7J2: mannitol-1-phosphate 5-dehydrogenase (EC 1.1.1.17); mannitol-1-phosphatase (EC 3.1.3.22) from Acinetobacter baumannii

29% id,
16% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory