Curated BLAST for Genomes

 

Curated BLAST

Searching in Salinicoccus carnicancri Crm (GCF_000330705.1)

Found 10 curated entries in PaperBLAST's database that match '1.2.1.71' as complete word(s).

These curated entries have 6 distinct sequences.

Running ublast with E ≤ 0.01

Found 10 relevant proteins in Salinicoccus carnicancri Crm, or try another query

C792_RS0112845 WP_017549863.1: aldehyde dehydrogenase family protein
is similar to:
PaperBLAST

SO0619: Succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71) from Shewanella oneidensis

31% id,
97% cov

Sama_3009: Succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71) from Shewanella amazonensis

31% id,
95% cov

ASTD_ECOLI / P76217: N-succinylglutamate 5-semialdehyde dehydrogenase; Succinylglutamic semialdehyde dehydrogenase; SGSD; EC 1.2.1.71 from Escherichia coli
YdjU / b1746: aldehyde dehydrogenase (EC 1.2.1.71) from Escherichia coli
astD / RF|NP_416260.1: N-succinylglutamate 5-semialdehyde dehydrogenase; EC 1.2.1.71 from Escherichia coli
astD / P76217: aldehyde dehydrogenase (EC 1.2.1.71) from Escherichia coli

29% id,
95% cov

More...

C792_RS0100830 WP_017547542.1: aldehyde dehydrogenase family protein
is similar to:
PaperBLAST

ASTD_PSEAE / O50174: N-succinylglutamate 5-semialdehyde dehydrogenase; Succinylglutamic semialdehyde dehydrogenase; SGSD; EC 1.2.1.71 from Pseudomonas aeruginosa
astD: succinylglutamate-semialdehyde dehydrogenase; EC 1.2.1.71 from Pseudomonas aeruginosa

31% id,
95% cov

Sama_3009: Succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71) from Shewanella amazonensis

31% id,
94% cov

SO0619: Succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71) from Shewanella oneidensis

30% id,
94% cov

More...

C792_RS0110425 WP_017549390.1: aldehyde dehydrogenase family protein
is similar to:
PaperBLAST

ASTD_PSEAE / O50174: N-succinylglutamate 5-semialdehyde dehydrogenase; Succinylglutamic semialdehyde dehydrogenase; SGSD; EC 1.2.1.71 from Pseudomonas aeruginosa
astD: succinylglutamate-semialdehyde dehydrogenase; EC 1.2.1.71 from Pseudomonas aeruginosa

32% id,
92% cov

Sama_3009: Succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71) from Shewanella amazonensis

31% id,
92% cov

SO0619: Succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71) from Shewanella oneidensis

30% id,
92% cov

More...

C792_RS0108995 WP_017549143.1: aldehyde dehydrogenase family protein
is similar to:
PaperBLAST

SO0619: Succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71) from Shewanella oneidensis

32% id,
92% cov

Sama_3009: Succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71) from Shewanella amazonensis

32% id,
92% cov

ASTD_SALTY / Q8ZPV0: N-succinylglutamate 5-semialdehyde dehydrogenase; Succinylglutamic semialdehyde dehydrogenase; SGSD; EC 1.2.1.71 from Salmonella typhimurium

30% id,
91% cov

More...

C792_RS0112615 WP_211205644.1: aldehyde dehydrogenase family protein
is similar to:
PaperBLAST

PfGW456L13_1974: Succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71) from Pseudomonas fluorescens

31% id,
93% cov

ASTD_PSEAE / O50174: N-succinylglutamate 5-semialdehyde dehydrogenase; Succinylglutamic semialdehyde dehydrogenase; SGSD; EC 1.2.1.71 from Pseudomonas aeruginosa
astD: succinylglutamate-semialdehyde dehydrogenase; EC 1.2.1.71 from Pseudomonas aeruginosa

31% id,
92% cov

Sama_3009: Succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71) from Shewanella amazonensis

30% id,
92% cov

More...

pruA C792_RS0103150 WP_017547991.1: L-glutamate gamma-semialdehyde dehydrogenase
is similar to:
PaperBLAST

ASTD_PSEAE / O50174: N-succinylglutamate 5-semialdehyde dehydrogenase; Succinylglutamic semialdehyde dehydrogenase; SGSD; EC 1.2.1.71 from Pseudomonas aeruginosa
astD: succinylglutamate-semialdehyde dehydrogenase; EC 1.2.1.71 from Pseudomonas aeruginosa

32% id,
90% cov

PfGW456L13_1974: Succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71) from Pseudomonas fluorescens

30% id,
92% cov

SO0619: Succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71) from Shewanella oneidensis

30% id,
89% cov

More...

pruA C792_RS0100265 WP_017547432.1: L-glutamate gamma-semialdehyde dehydrogenase
is similar to:
PaperBLAST

ASTD_PSEAE / O50174: N-succinylglutamate 5-semialdehyde dehydrogenase; Succinylglutamic semialdehyde dehydrogenase; SGSD; EC 1.2.1.71 from Pseudomonas aeruginosa
astD: succinylglutamate-semialdehyde dehydrogenase; EC 1.2.1.71 from Pseudomonas aeruginosa

31% id,
89% cov

PfGW456L13_1974: Succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71) from Pseudomonas fluorescens

28% id,
96% cov

SO0619: Succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71) from Shewanella oneidensis

28% id,
95% cov

More...

C792_RS0113000 WP_017549894.1: aldehyde dehydrogenase family protein
is similar to:
PaperBLAST

SO0619: Succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71) from Shewanella oneidensis

29% id,
94% cov

ASTD_PSEAE / O50174: N-succinylglutamate 5-semialdehyde dehydrogenase; Succinylglutamic semialdehyde dehydrogenase; SGSD; EC 1.2.1.71 from Pseudomonas aeruginosa
astD: succinylglutamate-semialdehyde dehydrogenase; EC 1.2.1.71 from Pseudomonas aeruginosa

29% id,
94% cov

ASTD_SALTY / Q8ZPV0: N-succinylglutamate 5-semialdehyde dehydrogenase; Succinylglutamic semialdehyde dehydrogenase; SGSD; EC 1.2.1.71 from Salmonella typhimurium

28% id,
94% cov

More...

hpaE C792_RS0112325 WP_017549761.1: 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase
is similar to:
PaperBLAST

SO0619: Succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71) from Shewanella oneidensis

28% id,
94% cov

Sama_3009: Succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71) from Shewanella amazonensis

28% id,
94% cov

ASTD_ECOLI / P76217: N-succinylglutamate 5-semialdehyde dehydrogenase; Succinylglutamic semialdehyde dehydrogenase; SGSD; EC 1.2.1.71 from Escherichia coli
YdjU / b1746: aldehyde dehydrogenase (EC 1.2.1.71) from Escherichia coli
astD / RF|NP_416260.1: N-succinylglutamate 5-semialdehyde dehydrogenase; EC 1.2.1.71 from Escherichia coli
astD / P76217: aldehyde dehydrogenase (EC 1.2.1.71) from Escherichia coli

28% id,
94% cov

More...

C792_RS0109240 WP_017549192.1: NAD-dependent succinate-semialdehyde dehydrogenase
is similar to:
PaperBLAST

ASTD_PSEAE / O50174: N-succinylglutamate 5-semialdehyde dehydrogenase; Succinylglutamic semialdehyde dehydrogenase; SGSD; EC 1.2.1.71 from Pseudomonas aeruginosa
astD: succinylglutamate-semialdehyde dehydrogenase; EC 1.2.1.71 from Pseudomonas aeruginosa

29% id,
90% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 10 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory