Curated BLAST for Genomes

 

Curated BLAST

Searching in Salinicoccus carnicancri Crm (GCF_000330705.1)

Found 103 curated entries in PaperBLAST's database that match '2.6.1.1' as complete word(s).

These curated entries have 76 distinct sequences.

Running ublast with E ≤ 0.01

Found 10 relevant proteins in Salinicoccus carnicancri Crm, or try another query

C792_RS0108030 WP_017548955.1: pyridoxal phosphate-dependent aminotransferase
is similar to:
PaperBLAST

A0A6F8T0V6: aspartate transaminase (EC 2.6.1.1) from Geobacillus sp.

56% id,
100% cov

aspB / GB|CAB14153.1: aspartate transaminase; EC 2.6.1.1 from Bacillus subtilis

56% id,
99% cov

aspC / GB|CAA63799.1: aspartate transaminase; EC 2.6.1.1 from Geobacillus stearothermophilus

55% id,
100% cov

More...

C792_RS0101225 WP_026090172.1: alanine--glyoxylate aminotransferase family protein
is similar to:
PaperBLAST

serC / Q58369: phosphoserine aminotransferase monomer (EC 2.6.1.1; EC 2.6.1.52) from Methanocaldococcus jannaschii

41% id,
93% cov

C792_RS0111735 WP_040608817.1: aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme
is similar to:
PaperBLAST

AAPAT_CERS1 / A3PMF8: Aspartate/prephenate aminotransferase; AspAT / PAT; EC 2.6.1.1; EC 2.6.1.79 from Cereibacter sphaeroides

37% id,
98% cov

AAPAT_THET8 / Q56232: Aspartate/prephenate aminotransferase; AspAT / PAT; Transaminase A; EC 2.6.1.1; EC 2.6.1.78 from Thermus thermophilus
aspC / RF|YP_143312.1: aspartate transaminase; EC 2.6.1.1 from Thermus thermophilus

40% id,
92% cov

AAT_THEMA / Q9X0Y2: Aspartate aminotransferase; AspAT; Transaminase A; EC 2.6.1.1 from Thermotoga maritima

40% id,
92% cov

More...

C792_RS0112765 WP_017549848.1: aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme
is similar to:
PaperBLAST

Q8YMS6: aspartate transaminase (EC 2.6.1.1) from Nostoc sp.

39% id,
93% cov

AAT_THEMA / Q9X0Y2: Aspartate aminotransferase; AspAT; Transaminase A; EC 2.6.1.1 from Thermotoga maritima

36% id,
99% cov

aspC / GB|CAA63799.1: aspartate transaminase; EC 2.6.1.1 from Geobacillus stearothermophilus

35% id,
99% cov

More...

C792_RS0106810 WP_017548713.1: aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme
is similar to:
PaperBLAST

Q8YTF2: aspartate transaminase (EC 2.6.1.1) from Nostoc sp.

34% id,
94% cov

Q8YUK5: aspartate transaminase (EC 2.6.1.1) from Nostoc sp.

31% id,
92% cov

Q8YMS6: aspartate transaminase (EC 2.6.1.1) from Nostoc sp.

27% id,
91% cov

More...

C792_RS0112120 WP_017549722.1: branched-chain amino acid aminotransferase
is similar to:
PaperBLAST

IlvE / b3770: branched-chain-amino-acid aminotransferase (EC 2.6.1.1; EC 2.6.1.57; EC 2.6.1.27; EC 2.6.1.42; EC 2.6.1.6) from Escherichia coli
ilvE / P0AB80: branched-chain-amino-acid aminotransferase (EC 2.6.1.1; EC 2.6.1.42; EC 2.6.1.6) from Escherichia coli

31% id,
96% cov

dat C792_RS0109150 WP_017549174.1: D-amino-acid transaminase
is similar to:
PaperBLAST

IlvE / b3770: branched-chain-amino-acid aminotransferase (EC 2.6.1.1; EC 2.6.1.57; EC 2.6.1.27; EC 2.6.1.42; EC 2.6.1.6) from Escherichia coli
ilvE / P0AB80: branched-chain-amino-acid aminotransferase (EC 2.6.1.1; EC 2.6.1.42; EC 2.6.1.6) from Escherichia coli

28% id,
91% cov

C792_RS0109135 WP_017549171.1: aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme
is similar to:
PaperBLAST

A0A6F8T0V6: aspartate transaminase (EC 2.6.1.1) from Geobacillus sp.

26% id,
87% cov

aspC / GB|CAA63799.1: aspartate transaminase; EC 2.6.1.1 from Geobacillus stearothermophilus

24% id,
90% cov

aspB-2 / P14909: aspartate aminotransferase subunit (EC 2.6.1.1) from Saccharolobus solfataricus
P14909: aspartate transaminase (EC 2.6.1.1) from Saccharolobus solfataricus

24% id,
90% cov

More...

C792_RS0113600 WP_017550013.1: histidinol-phosphate transaminase
is similar to:
PaperBLAST

hisC / P17731: histidinol-phosphate aminotransferase; tyrosine/phenylalanine aminotransferase (promiscuous) (EC 2.6.1.1; EC 2.6.1.9) from Bacillus subtilis

25% id,
79% cov

aspB-2 / P14909: aspartate aminotransferase subunit (EC 2.6.1.1) from Saccharolobus solfataricus
P14909: aspartate transaminase (EC 2.6.1.1) from Saccharolobus solfataricus

23% id,
84% cov

C792_RS0101025 WP_017547581.1: PLP-dependent aspartate aminotransferase family protein
is similar to:
PaperBLAST

A0A6F8T0V6: aspartate transaminase (EC 2.6.1.1) from Geobacillus sp.

25% id,
32% cov

aspB / GB|CAB14153.1: aspartate transaminase; EC 2.6.1.1 from Bacillus subtilis

30% id,
17% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 8 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory