Curated BLAST for Genomes

 

Curated BLAST

Searching in Salinicoccus carnicancri Crm (GCF_000330705.1)

Found 25 curated entries in PaperBLAST's database that match '2.6.1.5' as complete word(s).

These curated entries have 23 distinct sequences.

Running ublast with E ≤ 0.01

Found 7 relevant proteins in Salinicoccus carnicancri Crm, or try another query

hemL C792_RS0108435 WP_017549034.1: glutamate-1-semialdehyde 2,1-aminomutase
is similar to:
PaperBLAST

H8WR05: tyrosine transaminase (EC 2.6.1.5) from Variovorax paradoxus

33% id,
92% cov

C792_RS0109810 WP_017549268.1: glutamate-1-semialdehyde 2,1-aminomutase
is similar to:
PaperBLAST

H8WR05: tyrosine transaminase (EC 2.6.1.5) from Variovorax paradoxus

33% id,
90% cov

C792_RS0108030 WP_017548955.1: pyridoxal phosphate-dependent aminotransferase
is similar to:
PaperBLAST

ATTY_CAEEL / Q93703: Tyrosine aminotransferase; TAT; L-tyrosine:2-oxoglutarate aminotransferase; EC 2.6.1.5 from Caenorhabditis elegans

29% id,
78% cov

A0A2K9VP55: tyrosine transaminase (EC 2.6.1.5) from Malus domestica

25% id,
87% cov

TAT_ARATH / Q9LVY1: Tyrosine aminotransferase; TAT; L-tyrosine:2-oxoglutarate aminotransferase; EC 2.6.1.5 from Arabidopsis thaliana
Q9LVY1: tyrosine transaminase (EC 2.6.1.5) from Arabidopsis thaliana

24% id,
89% cov

More...

C792_RS0112765 WP_017549848.1: aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme
is similar to:
PaperBLAST

A0A0A7DQ59: tyrosine transaminase (EC 2.6.1.5) from Scutellaria baicalensis

24% id,
90% cov

ATTY_CAEEL / Q93703: Tyrosine aminotransferase; TAT; L-tyrosine:2-oxoglutarate aminotransferase; EC 2.6.1.5 from Caenorhabditis elegans

24% id,
88% cov

Q67Y55: tyrosine transaminase (EC 2.6.1.5) from Arabidopsis thaliana

26% id,
79% cov

More...

C792_RS0106810 WP_017548713.1: aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme
is similar to:
PaperBLAST

A0A2K9VP07: tyrosine transaminase (EC 2.6.1.5) from Malus domestica

24% id,
88% cov

Q67Y55: tyrosine transaminase (EC 2.6.1.5) from Arabidopsis thaliana

23% id,
82% cov

Q9FN30: tyrosine transaminase (EC 2.6.1.5) from Arabidopsis thaliana

22% id,
82% cov

More...

C792_RS0111735 WP_040608817.1: aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme
is similar to:
PaperBLAST

ATTY_CAEEL / Q93703: Tyrosine aminotransferase; TAT; L-tyrosine:2-oxoglutarate aminotransferase; EC 2.6.1.5 from Caenorhabditis elegans

25% id,
83% cov

ATTY_RAT / P04694: Tyrosine aminotransferase; TAT; L-tyrosine:2-oxoglutarate aminotransferase; EC 2.6.1.5 from Rattus norvegicus

24% id,
80% cov

ATTY_MOUSE / Q8QZR1: Tyrosine aminotransferase; TAT; L-tyrosine:2-oxoglutarate aminotransferase; EC 2.6.1.5 from Mus musculus
Q8QZR1: tyrosine transaminase (EC 2.6.1.5) from Mus musculus

24% id,
80% cov

More...

C792_RS0113600 WP_017550013.1: histidinol-phosphate transaminase
is similar to:
PaperBLAST

A0A2K9VP07: tyrosine transaminase (EC 2.6.1.5) from Malus domestica

19% id,
49% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 7 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

73109-74320 (frame +2) on NZ_ANAM01000008.1 Salinicoccus carnicancri Crm 50.SCCRM.1_8, whole genome shotgun sequence
is similar to:
PaperBLAST

ATTY_RAT / P04694: Tyrosine aminotransferase; TAT; L-tyrosine:2-oxoglutarate aminotransferase; EC 2.6.1.5 from Rattus norvegicus
Also see hits to annotated proteins above

24% id,
91% cov

ATTY_MOUSE / Q8QZR1: Tyrosine aminotransferase; TAT; L-tyrosine:2-oxoglutarate aminotransferase; EC 2.6.1.5 from Mus musculus
Q8QZR1: tyrosine transaminase (EC 2.6.1.5) from Mus musculus
Also see hits to annotated proteins above

24% id,
91% cov

ATTY_HUMAN / P17735: Tyrosine aminotransferase; TAT; L-tyrosine:2-oxoglutarate aminotransferase; EC 2.6.1.5 from Homo sapiens
Also see hits to annotated proteins above

24% id,
91% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory