Curated BLAST for Genomes

 

Curated BLAST

Searching in Salinicoccus carnicancri Crm (GCF_000330705.1)

Found 53 curated entries in PaperBLAST's database that match '2.7.1.4' as complete word(s).

These curated entries have 46 distinct sequences.

Running ublast with E ≤ 0.01

Found 9 relevant proteins in Salinicoccus carnicancri Crm, or try another query

C792_RS0109595 WP_017549253.1: ROK family protein
is similar to:
PaperBLAST

SCRK_FUSMR / Q09123: Fructokinase; EC 2.7.1.4 from Fusobacterium mortiferum

59% id,
100% cov

SCRK_BACSU / O05510: Putative fructokinase; Glucomannan utilization protein E; EC 2.7.1.4 from Bacillus subtilis
O05510: fructokinase (EC 2.7.1.4) from Bacillus subtilis

47% id,
97% cov

fruK / Q8KMQ5: fructokinase (EC 2.7.1.4) from Limosilactobacillus fermentum

43% id,
97% cov

More...

rbsK C792_RS0104365 WP_017548230.1: ribokinase
is similar to:
PaperBLAST

Q9M1B9: fructokinase (EC 2.7.1.4) from Arabidopsis thaliana

29% id,
96% cov

Q9SID0: fructokinase (EC 2.7.1.4) from Arabidopsis thaliana

30% id,
95% cov

P37829: fructokinase (EC 2.7.1.4) from Solanum tuberosum

30% id,
93% cov

More...

C792_RS0109000 WP_017549144.1: enoyl-CoA hydratase-related protein
is similar to:
PaperBLAST

A0A0H3C585: fructokinase (EC 2.7.1.4) from Halothermothrix orenii

28% id,
99% cov

C792_RS0107525 WP_017548855.1: ROK family glucokinase
is similar to:
PaperBLAST

SCRK_BACSU / O05510: Putative fructokinase; Glucomannan utilization protein E; EC 2.7.1.4 from Bacillus subtilis
O05510: fructokinase (EC 2.7.1.4) from Bacillus subtilis

28% id,
95% cov

Ga0059261_1776: Fructokinase (EC 2.7.1.4) from Sphingomonas koreensis

28% id,
56% cov

C792_RS0112925 WP_017549879.1: sugar kinase
is similar to:
PaperBLAST

Echvi_2804: Fructokinase (EC 2.7.1.4) from Echinicola vietnamensis

29% id,
92% cov

Q9C524: fructokinase (EC 2.7.1.4) from Arabidopsis thaliana

29% id,
82% cov

pfkB C792_RS0107290 WP_017548809.1: 1-phosphofructokinase
is similar to:
PaperBLAST

Pf6N2E2_1965: Fructokinase (EC 2.7.1.4) from Pseudomonas fluorescens

27% id,
98% cov

AO356_00035: Fructokinase (EC 2.7.1.4) from Pseudomonas fluorescens

26% id,
96% cov

frk / GB|AAB52373.1: fructokinase; EC 2.7.1.4 from Rhizobium leguminosarum

23% id,
71% cov

menB C792_RS14900 WP_017549201.1: 1,4-dihydroxy-2-naphthoyl-CoA synthase
is similar to:
PaperBLAST

A0A0H3C585: fructokinase (EC 2.7.1.4) from Halothermothrix orenii

27% id,
95% cov

C792_RS0110105 WP_026090318.1: ROK family protein
is similar to:
PaperBLAST

SCRK_BACSU / O05510: Putative fructokinase; Glucomannan utilization protein E; EC 2.7.1.4 from Bacillus subtilis
O05510: fructokinase (EC 2.7.1.4) from Bacillus subtilis

26% id,
95% cov

thiD C792_RS0111480 WP_017549594.1: bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase
is similar to:
PaperBLAST

C4M2I2: fructokinase (EC 2.7.1.4) from Entamoeba histolytica

25% id,
42% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 8 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

195770-196717 (frame +2) on NZ_ANAM01000003.1 Salinicoccus carnicancri Crm 50.SCCRM.1_3, whole genome shotgun sequence
is similar to:
PaperBLAST

P37829: fructokinase (EC 2.7.1.4) from Solanum tuberosum
Also see hits to annotated proteins above

30% id,
97% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory