Curated BLAST for Genomes

 

Curated BLAST

Searching in Salinicoccus carnicancri Crm (GCF_000330705.1)

Found 3 curated entries in PaperBLAST's database that match 'propionyl-CoA synthetase' as complete word(s).

These curated entries have 2 distinct sequences.

Running ublast with E ≤ 0.01

Found 4 relevant proteins in Salinicoccus carnicancri Crm, or try another query

acsA C792_RS0109060 WP_017549156.1: acetate--CoA ligase
is similar to:
PaperBLAST

YahU / b0335: propionyl-CoA synthetase (EC 6.2.1.17) from Escherichia coli
prpE / P77495: propionyl-CoA synthetase (EC 6.2.1.17) from Escherichia coli

29% id,
97% cov

PRPE_SALTY / P55912: Propionate--CoA ligase; Propionyl-CoA synthetase; EC 6.2.1.17 from Salmonella typhimurium

28% id,
97% cov

acsA C792_RS0110000 WP_017549306.1: acetate--CoA ligase
is similar to:
PaperBLAST

PRPE_SALTY / P55912: Propionate--CoA ligase; Propionyl-CoA synthetase; EC 6.2.1.17 from Salmonella typhimurium

30% id,
88% cov

YahU / b0335: propionyl-CoA synthetase (EC 6.2.1.17) from Escherichia coli
prpE / P77495: propionyl-CoA synthetase (EC 6.2.1.17) from Escherichia coli

29% id,
88% cov

menE C792_RS0109280 WP_017549200.1: o-succinylbenzoate--CoA ligase
is similar to:
PaperBLAST

YahU / b0335: propionyl-CoA synthetase (EC 6.2.1.17) from Escherichia coli
prpE / P77495: propionyl-CoA synthetase (EC 6.2.1.17) from Escherichia coli

24% id,
86% cov

PRPE_SALTY / P55912: Propionate--CoA ligase; Propionyl-CoA synthetase; EC 6.2.1.17 from Salmonella typhimurium

24% id,
59% cov

C792_RS0109340 WP_017549212.1: class I adenylate-forming enzyme family protein
is similar to:
PaperBLAST

YahU / b0335: propionyl-CoA synthetase (EC 6.2.1.17) from Escherichia coli
prpE / P77495: propionyl-CoA synthetase (EC 6.2.1.17) from Escherichia coli

22% id,
86% cov

PRPE_SALTY / P55912: Propionate--CoA ligase; Propionyl-CoA synthetase; EC 6.2.1.17 from Salmonella typhimurium

22% id,
84% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory