Curated BLAST for Genomes

 

Curated BLAST

Searching in Mariniradius saccharolyticus AK6 (GCF_000330725.2)

Found 42 curated entries in PaperBLAST's database that match '1.4.1.2' as complete word(s).

These curated entries have 33 distinct sequences.

Running ublast with E ≤ 0.01

Found 4 relevant proteins in Mariniradius saccharolyticus AK6, or try another query

C943_RS02640 C943_03187 WP_008623896.1: Glu/Leu/Phe/Val dehydrogenase
is similar to:
PaperBLAST

P96110: trimer complex (EC 1.4.1.2) from Thermotoga maritima

53% id,
98% cov

Q5QDM6: glutamate dehydrogenase (EC 1.4.1.2) from Lupinus luteus

47% id,
99% cov

GDH2 / Q38946: glutamate dehydrogenase β subunit (EC 1.4.1.2) from Arabidopsis thaliana

47% id,
99% cov

More...

C943_RS08810 C943_04548 WP_008626729.1: Glu/Leu/Phe/Val dehydrogenase
is similar to:
PaperBLAST

P00366: glutamate dehydrogenase (EC 1.4.1.2); glutamate dehydrogenase [NAD(P)+] (EC 1.4.1.3) from Bos taurus

51% id,
81% cov

P96110: trimer complex (EC 1.4.1.2) from Thermotoga maritima

42% id,
94% cov

Q852M0: glutamate dehydrogenase (EC 1.4.1.2) from Oryza sativa

42% id,
87% cov

More...

C943_RS20975 C943_03081 WP_008632060.1: Glu/Leu/Phe/Val dehydrogenase
is similar to:
PaperBLAST

Q9Y8I4: glutamate dehydrogenase (EC 1.4.1.2) from Pyrobaculum islandicum

28% id,
85% cov

Q0E5H9: glutamate dehydrogenase (EC 1.4.1.2) from Halobacillus halophilus

24% id,
38% cov

C943_RS11890 C943_00797 WP_008627970.1: Glu/Leu/Phe/Val dehydrogenase dimerization domain-containing protein
is similar to:
PaperBLAST

P93541: glutamate dehydrogenase (EC 1.4.1.2) from Solanum lycopersicum

25% id,
79% cov

DHE2_PYRCJ / A3MUY9: NAD(+)-dependent glutamate dehydrogenase; NAD-GDH; NAD-specific glutamate dehydrogenase; EC 1.4.1.2 from Pyrobaculum calidifontis
A3MUY9: glutamate dehydrogenase (EC 1.4.1.2) from Pyrobaculum calidifontis

28% id,
69% cov

Q852M0: glutamate dehydrogenase (EC 1.4.1.2) from Oryza sativa

24% id,
77% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory