Curated BLAST for Genomes

 

Curated BLAST

Searching in Halococcus hamelinensis 100A6 (GCF_000336675.1)

Found 4 curated entries in PaperBLAST's database that match '1.1.1.378' as complete word(s).

These curated entries have 2 distinct sequences.

Running ublast with E ≤ 0.01

Found 28 relevant proteins in Halococcus hamelinensis 100A6, or try another query

C447_RS01770 C447_01805 WP_007690267.1: SDR family oxidoreductase
is similar to:
PaperBLAST

RHAD_AZOVD / C1DMX5: L-rhamnose 1-dehydrogenase (NAD(P)(+)); RhaDH; AvLRA1; EC 1.1.1.378 from Azotobacter vinelandii
lra1 / C1DMX5: NAD(P)+-dependent L-rhamnose 1-dehydrogenase (EC 1.1.1.378; EC 1.1.1.173) from Azotobacter vinelandii

41% id,
96% cov

RHAD_SPHSS / Q1NEJ0: L-rhamnose 1-dehydrogenase (NAD(P)(+)); RhaDH; SpLRA1; EC 1.1.1.378 from Sphingomonas sp.
lra1 / Q1NEJ0: NAD(P)+-dependent L-rhamnose 1-dehydrogenase (EC 1.1.1.378; EC 1.1.1.173) from Sphingomonas sp.

39% id,
95% cov

C447_RS05270 C447_05293 WP_007691607.1: SDR family NAD(P)-dependent oxidoreductase
is similar to:
PaperBLAST

RHAD_AZOVD / C1DMX5: L-rhamnose 1-dehydrogenase (NAD(P)(+)); RhaDH; AvLRA1; EC 1.1.1.378 from Azotobacter vinelandii
lra1 / C1DMX5: NAD(P)+-dependent L-rhamnose 1-dehydrogenase (EC 1.1.1.378; EC 1.1.1.173) from Azotobacter vinelandii

41% id,
96% cov

RHAD_SPHSS / Q1NEJ0: L-rhamnose 1-dehydrogenase (NAD(P)(+)); RhaDH; SpLRA1; EC 1.1.1.378 from Sphingomonas sp.
lra1 / Q1NEJ0: NAD(P)+-dependent L-rhamnose 1-dehydrogenase (EC 1.1.1.378; EC 1.1.1.173) from Sphingomonas sp.

40% id,
96% cov

C447_RS11085 C447_11215 WP_007693907.1: SDR family NAD(P)-dependent oxidoreductase
is similar to:
PaperBLAST

RHAD_AZOVD / C1DMX5: L-rhamnose 1-dehydrogenase (NAD(P)(+)); RhaDH; AvLRA1; EC 1.1.1.378 from Azotobacter vinelandii
lra1 / C1DMX5: NAD(P)+-dependent L-rhamnose 1-dehydrogenase (EC 1.1.1.378; EC 1.1.1.173) from Azotobacter vinelandii

40% id,
97% cov

RHAD_SPHSS / Q1NEJ0: L-rhamnose 1-dehydrogenase (NAD(P)(+)); RhaDH; SpLRA1; EC 1.1.1.378 from Sphingomonas sp.
lra1 / Q1NEJ0: NAD(P)+-dependent L-rhamnose 1-dehydrogenase (EC 1.1.1.378; EC 1.1.1.173) from Sphingomonas sp.

37% id,
97% cov

C447_RS07170 C447_07233 WP_007692369.1: SDR family oxidoreductase
is similar to:
PaperBLAST

RHAD_AZOVD / C1DMX5: L-rhamnose 1-dehydrogenase (NAD(P)(+)); RhaDH; AvLRA1; EC 1.1.1.378 from Azotobacter vinelandii
lra1 / C1DMX5: NAD(P)+-dependent L-rhamnose 1-dehydrogenase (EC 1.1.1.378; EC 1.1.1.173) from Azotobacter vinelandii

39% id,
98% cov

RHAD_SPHSS / Q1NEJ0: L-rhamnose 1-dehydrogenase (NAD(P)(+)); RhaDH; SpLRA1; EC 1.1.1.378 from Sphingomonas sp.
lra1 / Q1NEJ0: NAD(P)+-dependent L-rhamnose 1-dehydrogenase (EC 1.1.1.378; EC 1.1.1.173) from Sphingomonas sp.

36% id,
98% cov

C447_RS10150 C447_10255 WP_007693543.1: SDR family oxidoreductase
is similar to:
PaperBLAST

RHAD_SPHSS / Q1NEJ0: L-rhamnose 1-dehydrogenase (NAD(P)(+)); RhaDH; SpLRA1; EC 1.1.1.378 from Sphingomonas sp.
lra1 / Q1NEJ0: NAD(P)+-dependent L-rhamnose 1-dehydrogenase (EC 1.1.1.378; EC 1.1.1.173) from Sphingomonas sp.

39% id,
98% cov

RHAD_AZOVD / C1DMX5: L-rhamnose 1-dehydrogenase (NAD(P)(+)); RhaDH; AvLRA1; EC 1.1.1.378 from Azotobacter vinelandii
lra1 / C1DMX5: NAD(P)+-dependent L-rhamnose 1-dehydrogenase (EC 1.1.1.378; EC 1.1.1.173) from Azotobacter vinelandii

39% id,
98% cov

C447_RS02270 C447_02327 WP_007690492.1: SDR family oxidoreductase
is similar to:
PaperBLAST

RHAD_AZOVD / C1DMX5: L-rhamnose 1-dehydrogenase (NAD(P)(+)); RhaDH; AvLRA1; EC 1.1.1.378 from Azotobacter vinelandii
lra1 / C1DMX5: NAD(P)+-dependent L-rhamnose 1-dehydrogenase (EC 1.1.1.378; EC 1.1.1.173) from Azotobacter vinelandii

39% id,
97% cov

C447_RS13895 C447_14139 WP_007695029.1: beta-ketoacyl-ACP reductase
is similar to:
PaperBLAST

RHAD_AZOVD / C1DMX5: L-rhamnose 1-dehydrogenase (NAD(P)(+)); RhaDH; AvLRA1; EC 1.1.1.378 from Azotobacter vinelandii
lra1 / C1DMX5: NAD(P)+-dependent L-rhamnose 1-dehydrogenase (EC 1.1.1.378; EC 1.1.1.173) from Azotobacter vinelandii

38% id,
98% cov

RHAD_SPHSS / Q1NEJ0: L-rhamnose 1-dehydrogenase (NAD(P)(+)); RhaDH; SpLRA1; EC 1.1.1.378 from Sphingomonas sp.
lra1 / Q1NEJ0: NAD(P)+-dependent L-rhamnose 1-dehydrogenase (EC 1.1.1.378; EC 1.1.1.173) from Sphingomonas sp.

36% id,
97% cov

C447_RS05850 C447_05862 WP_007691810.1: SDR family oxidoreductase
is similar to:
PaperBLAST

RHAD_AZOVD / C1DMX5: L-rhamnose 1-dehydrogenase (NAD(P)(+)); RhaDH; AvLRA1; EC 1.1.1.378 from Azotobacter vinelandii
lra1 / C1DMX5: NAD(P)+-dependent L-rhamnose 1-dehydrogenase (EC 1.1.1.378; EC 1.1.1.173) from Azotobacter vinelandii

39% id,
96% cov

RHAD_SPHSS / Q1NEJ0: L-rhamnose 1-dehydrogenase (NAD(P)(+)); RhaDH; SpLRA1; EC 1.1.1.378 from Sphingomonas sp.
lra1 / Q1NEJ0: NAD(P)+-dependent L-rhamnose 1-dehydrogenase (EC 1.1.1.378; EC 1.1.1.173) from Sphingomonas sp.

38% id,
96% cov

C447_RS07975 C447_08038 WP_007692680.1: glucose 1-dehydrogenase
is similar to:
PaperBLAST

RHAD_AZOVD / C1DMX5: L-rhamnose 1-dehydrogenase (NAD(P)(+)); RhaDH; AvLRA1; EC 1.1.1.378 from Azotobacter vinelandii
lra1 / C1DMX5: NAD(P)+-dependent L-rhamnose 1-dehydrogenase (EC 1.1.1.378; EC 1.1.1.173) from Azotobacter vinelandii

38% id,
97% cov

RHAD_SPHSS / Q1NEJ0: L-rhamnose 1-dehydrogenase (NAD(P)(+)); RhaDH; SpLRA1; EC 1.1.1.378 from Sphingomonas sp.
lra1 / Q1NEJ0: NAD(P)+-dependent L-rhamnose 1-dehydrogenase (EC 1.1.1.378; EC 1.1.1.173) from Sphingomonas sp.

36% id,
96% cov

C447_RS12350 C447_12535 WP_007694351.1: SDR family oxidoreductase
is similar to:
PaperBLAST

RHAD_SPHSS / Q1NEJ0: L-rhamnose 1-dehydrogenase (NAD(P)(+)); RhaDH; SpLRA1; EC 1.1.1.378 from Sphingomonas sp.
lra1 / Q1NEJ0: NAD(P)+-dependent L-rhamnose 1-dehydrogenase (EC 1.1.1.378; EC 1.1.1.173) from Sphingomonas sp.

37% id,
98% cov

RHAD_AZOVD / C1DMX5: L-rhamnose 1-dehydrogenase (NAD(P)(+)); RhaDH; AvLRA1; EC 1.1.1.378 from Azotobacter vinelandii
lra1 / C1DMX5: NAD(P)+-dependent L-rhamnose 1-dehydrogenase (EC 1.1.1.378; EC 1.1.1.173) from Azotobacter vinelandii

35% id,
98% cov

C447_RS02885 C447_02939 WP_007690719.1: glucose 1-dehydrogenase
is similar to:
PaperBLAST

RHAD_SPHSS / Q1NEJ0: L-rhamnose 1-dehydrogenase (NAD(P)(+)); RhaDH; SpLRA1; EC 1.1.1.378 from Sphingomonas sp.
lra1 / Q1NEJ0: NAD(P)+-dependent L-rhamnose 1-dehydrogenase (EC 1.1.1.378; EC 1.1.1.173) from Sphingomonas sp.

37% id,
98% cov

C447_RS00650 C447_00670 WP_007689819.1: glucose 1-dehydrogenase
is similar to:
PaperBLAST

RHAD_AZOVD / C1DMX5: L-rhamnose 1-dehydrogenase (NAD(P)(+)); RhaDH; AvLRA1; EC 1.1.1.378 from Azotobacter vinelandii
lra1 / C1DMX5: NAD(P)+-dependent L-rhamnose 1-dehydrogenase (EC 1.1.1.378; EC 1.1.1.173) from Azotobacter vinelandii

37% id,
96% cov

RHAD_SPHSS / Q1NEJ0: L-rhamnose 1-dehydrogenase (NAD(P)(+)); RhaDH; SpLRA1; EC 1.1.1.378 from Sphingomonas sp.
lra1 / Q1NEJ0: NAD(P)+-dependent L-rhamnose 1-dehydrogenase (EC 1.1.1.378; EC 1.1.1.173) from Sphingomonas sp.

37% id,
96% cov

C447_RS13070 C447_13272 WP_007694646.1: glucose 1-dehydrogenase
is similar to:
PaperBLAST

RHAD_AZOVD / C1DMX5: L-rhamnose 1-dehydrogenase (NAD(P)(+)); RhaDH; AvLRA1; EC 1.1.1.378 from Azotobacter vinelandii
lra1 / C1DMX5: NAD(P)+-dependent L-rhamnose 1-dehydrogenase (EC 1.1.1.378; EC 1.1.1.173) from Azotobacter vinelandii

37% id,
97% cov

RHAD_SPHSS / Q1NEJ0: L-rhamnose 1-dehydrogenase (NAD(P)(+)); RhaDH; SpLRA1; EC 1.1.1.378 from Sphingomonas sp.
lra1 / Q1NEJ0: NAD(P)+-dependent L-rhamnose 1-dehydrogenase (EC 1.1.1.378; EC 1.1.1.173) from Sphingomonas sp.

35% id,
98% cov

C447_RS11090 C447_11220 WP_007693908.1: SDR family oxidoreductase
is similar to:
PaperBLAST

RHAD_AZOVD / C1DMX5: L-rhamnose 1-dehydrogenase (NAD(P)(+)); RhaDH; AvLRA1; EC 1.1.1.378 from Azotobacter vinelandii
lra1 / C1DMX5: NAD(P)+-dependent L-rhamnose 1-dehydrogenase (EC 1.1.1.378; EC 1.1.1.173) from Azotobacter vinelandii

36% id,
96% cov

RHAD_SPHSS / Q1NEJ0: L-rhamnose 1-dehydrogenase (NAD(P)(+)); RhaDH; SpLRA1; EC 1.1.1.378 from Sphingomonas sp.
lra1 / Q1NEJ0: NAD(P)+-dependent L-rhamnose 1-dehydrogenase (EC 1.1.1.378; EC 1.1.1.173) from Sphingomonas sp.

33% id,
96% cov

C447_RS11865 C447_11990 WP_049904465.1: beta-ketoacyl-ACP reductase
is similar to:
PaperBLAST

RHAD_AZOVD / C1DMX5: L-rhamnose 1-dehydrogenase (NAD(P)(+)); RhaDH; AvLRA1; EC 1.1.1.378 from Azotobacter vinelandii
lra1 / C1DMX5: NAD(P)+-dependent L-rhamnose 1-dehydrogenase (EC 1.1.1.378; EC 1.1.1.173) from Azotobacter vinelandii

35% id,
96% cov

RHAD_SPHSS / Q1NEJ0: L-rhamnose 1-dehydrogenase (NAD(P)(+)); RhaDH; SpLRA1; EC 1.1.1.378 from Sphingomonas sp.
lra1 / Q1NEJ0: NAD(P)+-dependent L-rhamnose 1-dehydrogenase (EC 1.1.1.378; EC 1.1.1.173) from Sphingomonas sp.

32% id,
97% cov

C447_RS09975 C447_10072 WP_007693447.1: SDR family oxidoreductase
is similar to:
PaperBLAST

RHAD_AZOVD / C1DMX5: L-rhamnose 1-dehydrogenase (NAD(P)(+)); RhaDH; AvLRA1; EC 1.1.1.378 from Azotobacter vinelandii
lra1 / C1DMX5: NAD(P)+-dependent L-rhamnose 1-dehydrogenase (EC 1.1.1.378; EC 1.1.1.173) from Azotobacter vinelandii

35% id,
96% cov

C447_RS12965 C447_13167 WP_007694583.1: SDR family oxidoreductase
is similar to:
PaperBLAST

RHAD_SPHSS / Q1NEJ0: L-rhamnose 1-dehydrogenase (NAD(P)(+)); RhaDH; SpLRA1; EC 1.1.1.378 from Sphingomonas sp.
lra1 / Q1NEJ0: NAD(P)+-dependent L-rhamnose 1-dehydrogenase (EC 1.1.1.378; EC 1.1.1.173) from Sphingomonas sp.

35% id,
95% cov

RHAD_AZOVD / C1DMX5: L-rhamnose 1-dehydrogenase (NAD(P)(+)); RhaDH; AvLRA1; EC 1.1.1.378 from Azotobacter vinelandii
lra1 / C1DMX5: NAD(P)+-dependent L-rhamnose 1-dehydrogenase (EC 1.1.1.378; EC 1.1.1.173) from Azotobacter vinelandii

32% id,
96% cov

C447_RS03705 C447_03751 WP_007691070.1: SDR family oxidoreductase
is similar to:
PaperBLAST

RHAD_AZOVD / C1DMX5: L-rhamnose 1-dehydrogenase (NAD(P)(+)); RhaDH; AvLRA1; EC 1.1.1.378 from Azotobacter vinelandii
lra1 / C1DMX5: NAD(P)+-dependent L-rhamnose 1-dehydrogenase (EC 1.1.1.378; EC 1.1.1.173) from Azotobacter vinelandii

34% id,
97% cov

RHAD_SPHSS / Q1NEJ0: L-rhamnose 1-dehydrogenase (NAD(P)(+)); RhaDH; SpLRA1; EC 1.1.1.378 from Sphingomonas sp.
lra1 / Q1NEJ0: NAD(P)+-dependent L-rhamnose 1-dehydrogenase (EC 1.1.1.378; EC 1.1.1.173) from Sphingomonas sp.

32% id,
96% cov

C447_RS17005 C447_00565 WP_007689767.1: SDR family oxidoreductase
is similar to:
PaperBLAST

RHAD_SPHSS / Q1NEJ0: L-rhamnose 1-dehydrogenase (NAD(P)(+)); RhaDH; SpLRA1; EC 1.1.1.378 from Sphingomonas sp.
lra1 / Q1NEJ0: NAD(P)+-dependent L-rhamnose 1-dehydrogenase (EC 1.1.1.378; EC 1.1.1.173) from Sphingomonas sp.

33% id,
99% cov

C447_RS11005 C447_11140 WP_007693875.1: SDR family oxidoreductase
is similar to:
PaperBLAST

RHAD_AZOVD / C1DMX5: L-rhamnose 1-dehydrogenase (NAD(P)(+)); RhaDH; AvLRA1; EC 1.1.1.378 from Azotobacter vinelandii
lra1 / C1DMX5: NAD(P)+-dependent L-rhamnose 1-dehydrogenase (EC 1.1.1.378; EC 1.1.1.173) from Azotobacter vinelandii

34% id,
95% cov

RHAD_SPHSS / Q1NEJ0: L-rhamnose 1-dehydrogenase (NAD(P)(+)); RhaDH; SpLRA1; EC 1.1.1.378 from Sphingomonas sp.
lra1 / Q1NEJ0: NAD(P)+-dependent L-rhamnose 1-dehydrogenase (EC 1.1.1.378; EC 1.1.1.173) from Sphingomonas sp.

33% id,
91% cov

C447_RS06480 C447_06516 WP_007692061.1: SDR family NAD(P)-dependent oxidoreductase
is similar to:
PaperBLAST

RHAD_AZOVD / C1DMX5: L-rhamnose 1-dehydrogenase (NAD(P)(+)); RhaDH; AvLRA1; EC 1.1.1.378 from Azotobacter vinelandii
lra1 / C1DMX5: NAD(P)+-dependent L-rhamnose 1-dehydrogenase (EC 1.1.1.378; EC 1.1.1.173) from Azotobacter vinelandii

33% id,
96% cov

C447_RS12080 C447_12200 WP_007694242.1: SDR family NAD(P)-dependent oxidoreductase
is similar to:
PaperBLAST

RHAD_SPHSS / Q1NEJ0: L-rhamnose 1-dehydrogenase (NAD(P)(+)); RhaDH; SpLRA1; EC 1.1.1.378 from Sphingomonas sp.
lra1 / Q1NEJ0: NAD(P)+-dependent L-rhamnose 1-dehydrogenase (EC 1.1.1.378; EC 1.1.1.173) from Sphingomonas sp.

32% id,
96% cov

C447_RS12550 C447_12747 WP_029601933.1: SDR family oxidoreductase
is similar to:
PaperBLAST

RHAD_AZOVD / C1DMX5: L-rhamnose 1-dehydrogenase (NAD(P)(+)); RhaDH; AvLRA1; EC 1.1.1.378 from Azotobacter vinelandii
lra1 / C1DMX5: NAD(P)+-dependent L-rhamnose 1-dehydrogenase (EC 1.1.1.378; EC 1.1.1.173) from Azotobacter vinelandii

31% id,
98% cov

C447_RS07915 C447_07978 WP_007692662.1: SDR family NAD(P)-dependent oxidoreductase
is similar to:
PaperBLAST

RHAD_SPHSS / Q1NEJ0: L-rhamnose 1-dehydrogenase (NAD(P)(+)); RhaDH; SpLRA1; EC 1.1.1.378 from Sphingomonas sp.
lra1 / Q1NEJ0: NAD(P)+-dependent L-rhamnose 1-dehydrogenase (EC 1.1.1.378; EC 1.1.1.173) from Sphingomonas sp.

30% id,
96% cov

C447_RS05275 C447_05298 WP_007691608.1: SDR family oxidoreductase
is similar to:
PaperBLAST

RHAD_AZOVD / C1DMX5: L-rhamnose 1-dehydrogenase (NAD(P)(+)); RhaDH; AvLRA1; EC 1.1.1.378 from Azotobacter vinelandii
lra1 / C1DMX5: NAD(P)+-dependent L-rhamnose 1-dehydrogenase (EC 1.1.1.378; EC 1.1.1.173) from Azotobacter vinelandii

31% id,
91% cov

RHAD_SPHSS / Q1NEJ0: L-rhamnose 1-dehydrogenase (NAD(P)(+)); RhaDH; SpLRA1; EC 1.1.1.378 from Sphingomonas sp.
lra1 / Q1NEJ0: NAD(P)+-dependent L-rhamnose 1-dehydrogenase (EC 1.1.1.378; EC 1.1.1.173) from Sphingomonas sp.

28% id,
93% cov

C447_RS10265 C447_10390 WP_007693583.1: SDR family oxidoreductase
is similar to:
PaperBLAST

RHAD_AZOVD / C1DMX5: L-rhamnose 1-dehydrogenase (NAD(P)(+)); RhaDH; AvLRA1; EC 1.1.1.378 from Azotobacter vinelandii
lra1 / C1DMX5: NAD(P)+-dependent L-rhamnose 1-dehydrogenase (EC 1.1.1.378; EC 1.1.1.173) from Azotobacter vinelandii

32% id,
67% cov

C447_RS04410 C447_04437 WP_007691308.1: oxidoreductase
is similar to:
PaperBLAST

RHAD_SPHSS / Q1NEJ0: L-rhamnose 1-dehydrogenase (NAD(P)(+)); RhaDH; SpLRA1; EC 1.1.1.378 from Sphingomonas sp.
lra1 / Q1NEJ0: NAD(P)+-dependent L-rhamnose 1-dehydrogenase (EC 1.1.1.378; EC 1.1.1.173) from Sphingomonas sp.

34% id,
59% cov

RHAD_AZOVD / C1DMX5: L-rhamnose 1-dehydrogenase (NAD(P)(+)); RhaDH; AvLRA1; EC 1.1.1.378 from Azotobacter vinelandii
lra1 / C1DMX5: NAD(P)+-dependent L-rhamnose 1-dehydrogenase (EC 1.1.1.378; EC 1.1.1.173) from Azotobacter vinelandii

31% id,
56% cov

C447_RS07110 C447_07168 WP_007692341.1: SDR family NAD(P)-dependent oxidoreductase
is similar to:
PaperBLAST

RHAD_AZOVD / C1DMX5: L-rhamnose 1-dehydrogenase (NAD(P)(+)); RhaDH; AvLRA1; EC 1.1.1.378 from Azotobacter vinelandii
lra1 / C1DMX5: NAD(P)+-dependent L-rhamnose 1-dehydrogenase (EC 1.1.1.378; EC 1.1.1.173) from Azotobacter vinelandii

38% id,
37% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 23 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory