Curated BLAST for Genomes

 

Curated BLAST

Searching in Halococcus hamelinensis 100A6 (GCF_000336675.1)

Found 41 curated entries in PaperBLAST's database that match '2.7.1.2' as complete word(s).

These curated entries have 33 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Halococcus hamelinensis 100A6, or try another query

C447_RS07910 C447_07973 WP_007692661.1: ROK family protein
is similar to:
PaperBLAST

GLK_AERPE / Q9YA47: Glucokinase; ATP-dependent glucokinase; ATP-GLK; Glucose kinase; EC 2.7.1.2 from Aeropyrum pernix

36% id,
97% cov

GLK_PYRCJ / A3MUZ0: Glucokinase; ATP-dependent glucokinase; ATP-GLK; Glucose kinase; EC 2.7.1.2 from Pyrobaculum calidifontis
A3MUZ0: glucokinase (EC 2.7.1.2) from Pyrobaculum calidifontis

35% id,
95% cov

Q8RDE9: glucokinase (EC 2.7.1.2) from Caldanaerobacter subterraneus

34% id,
98% cov

More...

mvk C447_RS14880 C447_15111 WP_007695331.1: mevalonate kinase
is similar to:
PaperBLAST

B1KDE7: glucokinase (EC 2.7.1.2) from Shewanella woodyi

28% id,
45% cov

B1KD89: glucokinase (EC 2.7.1.2) from Shewanella woodyi

30% id,
38% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory