Curated BLAST for Genomes

 

Curated BLAST

Searching in Halococcus hamelinensis 100A6 (GCF_000336675.1)

Found 18 curated entries in PaperBLAST's database that match '2.7.1.45' as complete word(s).

These curated entries have 16 distinct sequences.

Running ublast with E ≤ 0.01

Found 4 relevant proteins in Halococcus hamelinensis 100A6, or try another query

C447_RS14190 C447_14441 WP_049904537.1: sugar kinase
is similar to:
PaperBLAST

Q0K080: dehydrogluconokinase (EC 2.7.1.13); 2-dehydro-3-deoxygluconokinase (EC 2.7.1.45) from Cupriavidus necator

48% id,
96% cov

KDGK_BACSU / P50845: 2-dehydro-3-deoxygluconokinase; 2-keto-3-deoxygluconokinase; 3-deoxy-2-oxo-D-gluconate kinase; KDG kinase; EC 2.7.1.45 from Bacillus subtilis

43% id,
98% cov

KDGK_THET8 / Q53W83: 2-dehydro-3-deoxygluconokinase; 2-keto-3-deoxygluconokinase; 3-deoxy-2-oxo-D-gluconate kinase; KDG kinase; EC 2.7.1.45 from Thermus thermophilus

41% id,
97% cov

More...

C447_RS05255 C447_05278 WP_007691604.1: sugar kinase
is similar to:
PaperBLAST

D4GSE6: 2-dehydro-3-deoxyglucono/galactono-kinase (EC 2.7.1.178); 2-dehydro-3-deoxygluconokinase (EC 2.7.1.45) from Haloferax volcanii

38% id,
99% cov

2afbA / Q9WXS2: Crystal structure of 2-dehydro-3- deoxygluconokinase (ec 2.7.1.45) (tm0067) from thermotoga maritima at 2.05 a resolution

24% id,
98% cov

Q9WXS2: 2-dehydro-3-deoxygluconokinase (EC 2.7.1.45) from Thermotoga maritima

23% id,
99% cov

More...

C447_RS14185 C447_14436 WP_007695123.1: carbohydrate kinase
is similar to:
PaperBLAST

KDGK_THET8 / Q53W83: 2-dehydro-3-deoxygluconokinase; 2-keto-3-deoxygluconokinase; 3-deoxy-2-oxo-D-gluconate kinase; KDG kinase; EC 2.7.1.45 from Thermus thermophilus

33% id,
94% cov

KDGK_THETE / Q704D0: 2-dehydro-3-deoxygluconokinase; 2-keto-3-deoxygluconokinase; 3-deoxy-2-oxo-D-gluconate kinase; KDG kinase; EC 2.7.1.45 from Thermoproteus tenax

30% id,
93% cov

KDGK_SULTO / Q96XN9: 2-dehydro-3-deoxygluconokinase; 2-keto-3-deoxy-D-gluconate kinase; KDG kinase; KDGK; EC 2.7.1.45 from Sulfurisphaera tokodaii
Q96XN9: 2-dehydro-3-deoxygluconokinase (EC 2.7.1.45) from Sulfurisphaera tokodaii

26% id,
98% cov

More...

pfkB C447_RS02450 C447_02507 WP_007690568.1: 1-phosphofructokinase
is similar to:
PaperBLAST

Q0K080: dehydrogluconokinase (EC 2.7.1.13); 2-dehydro-3-deoxygluconokinase (EC 2.7.1.45) from Cupriavidus necator

44% id,
32% cov

KDGK_BACSU / P50845: 2-dehydro-3-deoxygluconokinase; 2-keto-3-deoxygluconokinase; 3-deoxy-2-oxo-D-gluconate kinase; KDG kinase; EC 2.7.1.45 from Bacillus subtilis

29% id,
39% cov

RR42_RS28860: 2-dehydro-3-deoxygluconokinase (EC 2.7.1.45) from Cupriavidus basilensis

31% id,
35% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 4 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory