Curated BLAST for Genomes

 

Curated BLAST

Searching in Nocardiopsis lucentensis DSM 44048 (GCF_000341125.1)

Found 80 curated entries in PaperBLAST's database that match '2.5.1.47' as complete word(s).

These curated entries have 59 distinct sequences.

Running ublast with E ≤ 0.01

Found 11 relevant proteins in Nocardiopsis lucentensis DSM 44048, or try another query

D471_RS0120240 WP_017600305.1: cysteine synthase
is similar to:		 PaperBLAST

CS1 / A2EI82: O-phosphoserine sulfhydrylase monomer (EC 2.5.1.47; EC 2.5.1.65) from Trichomonas vaginalis

 45% id,
99% cov

A2GMG5: cysteine synthase (EC 2.5.1.47) from Trichomonas vaginalis

 44% id,
99% cov

P29848: S-sulfo-L-cysteine synthase (O-acetyl-L-serine-dependent) (EC 2.5.1.144); cysteine synthase (EC 2.5.1.47) from Salmonella enterica

 43% id,
96% cov

More...

D471_RS0107595 WP_017598059.1: cystathionine beta-synthase
is similar to:		 PaperBLAST

CYSK_BACSU / P37887: Cysteine synthase; CSase; O-acetylserine (thiol)-lyase; OAS-TL; Superoxide-inducible protein 11; SOI11; EC 2.5.1.47 from Bacillus subtilis
P37887: cysteine synthase (EC 2.5.1.47) from Bacillus subtilis

 44% id,
97% cov

CYSK_MYCTU / P9WP55: O-acetylserine sulfhydrylase; OAS sulfhydrylase; OASS; Cysteine synthase A; CSase A; O-acetylserine (thiol)-lyase A; OAS-TL A; O-acetylserine-specific cysteine synthase; Sulfide-dependent cysteine synthase; EC 2.5.1.47 from Mycobacterium tuberculosis
P9WP55: cysteine synthase (EC 2.5.1.47) from Mycobacterium tuberculosis

 43% id,
100% cov

Q84IF9: cysteine synthase (EC 2.5.1.47); L-3-cyanoalanine synthase (EC 4.4.1.9) from Geobacillus stearothermophilus

 44% id,
97% cov

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D471_RS0102240 WP_017597122.1: aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme
is similar to:		 PaperBLAST

CYSD_YEAST / P06106: Homocysteine/cysteine synthase; O-acetylserine/O-acetylhomoserine sulfhydrylase; OAS-OAH SHLase; OAS-OAH sulfhydrylase; EC 2.5.1.47; EC 2.5.1.49 from Saccharomyces cerevisiae

 34% id,
98% cov

D471_RS0112200 WP_017598874.1: pyridoxal-phosphate dependent enzyme
is similar to:		 PaperBLAST

CS1 / A2EI82: O-phosphoserine sulfhydrylase monomer (EC 2.5.1.47; EC 2.5.1.65) from Trichomonas vaginalis

 32% id,
98% cov

A2GMG5: cysteine synthase (EC 2.5.1.47) from Trichomonas vaginalis

 31% id,
98% cov

E5LPF4: cysteine synthase (EC 2.5.1.47) from Lacticaseibacillus casei

 31% id,
97% cov

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D471_RS0109935 WP_017598479.1: pyridoxal-phosphate dependent enzyme
is similar to:		 PaperBLAST

W5S3I4: cysteine synthase (EC 2.5.1.47) from Leucaena leucocephala

 29% id,
97% cov

A0A2H5HU77: cysteine synthase (EC 2.5.1.47) from Lathyrus sativus

 28% id,
96% cov

F5HTD7: cysteine synthase (EC 2.5.1.47) from Mimosa pudica

 28% id,
97% cov

More...

D471_RS0106495 WP_026127473.1: PLP-dependent cysteine synthase family protein
is similar to:		 PaperBLAST

F9UT54: cysteine synthase (EC 2.5.1.47); cystathionine beta-synthase (EC 4.2.1.22) from Lactiplantibacillus plantarum

 29% id,
93% cov

DCSD_STRLA / D2Z027: O-ureido-L-serine synthase; Cysteine synthase homolog DscD; O-acetylserine sulfhydrylase; EC 2.6.99.3; EC 2.5.1.47 from Streptomyces lavendulae
dcsD / D2Z027: O-ureido-L-serine synthase (EC 2.5.1.47; EC 2.6.99.3) from Streptomyces lavendulae
D2Z027: cysteine synthase (EC 2.5.1.47); O-ureido-L-serine synthase (EC 2.6.99.3) from Streptomyces lavendulae

 30% id,
91% cov

A8YBP8: cysteine synthase (EC 2.5.1.47) from Microcystis aeruginosa

 27% id,
95% cov

More...

D471_RS0112815 WP_017598981.1: threonine/serine dehydratase
is similar to:		 PaperBLAST

CYSK_SALTY / P0A1E3: Cysteine synthase A; CSase A; O-acetylserine (thiol)-lyase A; OAS-TL A; O-acetylserine sulfhydrylase A; EC 2.5.1.47 from Salmonella typhimurium
P0A1E3: cysteine synthase (EC 2.5.1.47) from Salmonella enterica

 26% id,
84% cov

CYSK_ECOLI / P0ABK5: Cysteine synthase A; CSase A; O-acetylserine (thiol)-lyase A; OAS-TL A; O-acetylserine sulfhydrylase A; S-carboxymethylcysteine synthase; Sulfate starvation-induced protein 5; SSI5; EC 2.5.1.47; EC 4.5.1.5 from Escherichia coli
Ssi5 / b2414: cysteine synthase A (EC 2.5.1.47; EC 4.4.1.1; EC 4.4.1.28) from Escherichia coli
cysK / P0ABK5: cysteine synthase A (EC 2.5.1.47; EC 4.4.1.1) from Escherichia coli
P0ABK5: cysteine synthase (EC 2.5.1.47) from Escherichia coli

 26% id,
84% cov

CYSK3_CAEEL / O01592: Cysteine synthase 3; O-acetylserine (thiol)-lyase 3; OAS-TL; EC 2.5.1.47 from Caenorhabditis elegans

 26% id,
78% cov

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thrC D471_RS0120560 WP_017600364.1: threonine synthase
is similar to:		 PaperBLAST

CYSK_NEUCR / Q7RYW6: Cysteine synthase 1; CS 1; O-acetylserine (thiol)-lyase 1; OAS-TL 1; O-acetylserine sulfhydrylase 1; O-succinylserine sulfhydrylase; EC 2.5.1.-; EC 2.5.1.47 from Neurospora crassa

 26% id,
80% cov

CYSC_SPIOL / Q43153: Bifunctional L-3-cyanoalanine synthase/cysteine synthase, mitochondrial; Beta-cyanoalanine synthase; SoCAS; Beta-substituted Ala synthase 3-1; SPIol-Bsas3-1; Cysteine synthase C; EC 2.5.1.47; EC 4.4.1.9 from Spinacia oleracea

 25% id,
76% cov

A0A0F6AQU1: cysteine synthase (EC 2.5.1.47) from Brucella abortus

 30% id,
55% cov

More...

D471_RS0107605 WP_017598061.1: cystathionine gamma-synthase
is similar to:		 PaperBLAST

CYSD_YEAST / P06106: Homocysteine/cysteine synthase; O-acetylserine/O-acetylhomoserine sulfhydrylase; OAS-OAH SHLase; OAS-OAH sulfhydrylase; EC 2.5.1.47; EC 2.5.1.49 from Saccharomyces cerevisiae

 41% id,
49% cov

METW_YEAST / Q12198: Homocysteine/cysteine synthase; Hydrogen sulfide utilizing 1; O-acetylserine/O-acetylhomoserine sulfhydrylase; OAS-OAH SHLase; OAS-OAH sulfhydrylase; EC 2.5.1.47; EC 2.5.1.49 from Saccharomyces cerevisiae

 39% id,
13% cov

D471_RS0112340 WP_017598900.1: threonine/serine dehydratase
is similar to:		 PaperBLAST

CGL_ARATH / F4K5T2: Bifunctional cystathionine gamma-lyase/cysteine synthase; Beta-substituted Ala synthase 4;3; ARAth-Bsas4;3; L-cysteine desulfhydrase 1; DES1; O-acetylserine (thiol)-lyase; OASTL; Protein CS-LIKE; EC 2.5.1.47; EC 4.4.1.1 from Arabidopsis thaliana

 24% id,
74% cov

D471_RS0108275 WP_017598182.1: aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme
is similar to:		 PaperBLAST

CYSD_YEAST / P06106: Homocysteine/cysteine synthase; O-acetylserine/O-acetylhomoserine sulfhydrylase; OAS-OAH SHLase; OAS-OAH sulfhydrylase; EC 2.5.1.47; EC 2.5.1.49 from Saccharomyces cerevisiae

 33% id,
46% cov

CYSD_YEAST / P06106: Homocysteine/cysteine synthase; O-acetylserine/O-acetylhomoserine sulfhydrylase; OAS-OAH SHLase; OAS-OAH sulfhydrylase; EC 2.5.1.47; EC 2.5.1.49 from Saccharomyces cerevisiae

 32% id,
40% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 10 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory