Curated BLAST for Genomes

 

Curated BLAST

Searching in Streptococcus massiliensis 4401825 (GCF_000341525.1)

Found 24 curated entries in PaperBLAST's database that match '1.1.1.6' as complete word(s).

These curated entries have 15 distinct sequences.

Running ublast with E ≤ 0.01

Found 7 relevant proteins in Streptococcus massiliensis 4401825, or try another query

BN415_RS08265 WP_018371638.1: glycerol dehydrogenase
is similar to:
PaperBLAST

GLDA_GEOSE / P32816: Glycerol dehydrogenase; GDH; GLDH; GlyDH; EC 1.1.1.6 from Geobacillus stearothermophilus
gldA / GI|142978: glycerol dehydrogenase; EC 1.1.1.6 from Geobacillus stearothermophilus
P32816: glycerol dehydrogenase (EC 1.1.1.6) from Geobacillus stearothermophilus

56% id,
98% cov

GLDA_CITFR / P45511: Glycerol dehydrogenase; GDH; GLDH; EC 1.1.1.6 from Citrobacter freundii
dhaD / GB|AAB48844.1: glycerol dehydrogenase; EC 1.1.1.6 from Citrobacter freundii

50% id,
97% cov

Q8ZKM9: glycerol dehydrogenase (EC 1.1.1.6) from Salmonella enterica

49% id,
97% cov

More...

BN415_RS09645 WP_018371882.1: iron-containing alcohol dehydrogenase
is similar to:
PaperBLAST

ADH1_GEOTN / A4IP64: Long-chain-alcohol dehydrogenase 1; Alcohol dehydrogenase 1; ADH1; Fatty alcohol oxidoreductase 1; Glycerol dehydrogenase; EC 1.1.1.192; EC 1.1.1.6 from Geobacillus thermodenitrificans

34% id,
97% cov

adhE BN415_RS08155 WP_018372252.1: bifunctional acetaldehyde-CoA/alcohol dehydrogenase
is similar to:
PaperBLAST

ADH1_GEOTN / A4IP64: Long-chain-alcohol dehydrogenase 1; Alcohol dehydrogenase 1; ADH1; Fatty alcohol oxidoreductase 1; Glycerol dehydrogenase; EC 1.1.1.192; EC 1.1.1.6 from Geobacillus thermodenitrificans

35% id,
92% cov

BN415_RS07845 WP_018371509.1: 1-propanol dehydrogenase PduQ
is similar to:
PaperBLAST

ADH1_GEOTN / A4IP64: Long-chain-alcohol dehydrogenase 1; Alcohol dehydrogenase 1; ADH1; Fatty alcohol oxidoreductase 1; Glycerol dehydrogenase; EC 1.1.1.192; EC 1.1.1.6 from Geobacillus thermodenitrificans

32% id,
91% cov

BN415_RS07795 WP_018371519.1: SDR family oxidoreductase
is similar to:
PaperBLAST

GOLD_LISIN / Q92EU6: NAD-dependent glycerol dehydrogenase; Dha-forming NAD-dependent glycerol dehydrogenase; EC 1.1.1.6 from Listeria innocua

30% id,
95% cov

BN415_RS03970 WP_018370993.1: 3-oxoacyl-ACP reductase
is similar to:
PaperBLAST

GOLD_LISIN / Q92EU6: NAD-dependent glycerol dehydrogenase; Dha-forming NAD-dependent glycerol dehydrogenase; EC 1.1.1.6 from Listeria innocua

30% id,
94% cov

BN415_RS01980 WP_018371259.1: SDR family NAD(P)-dependent oxidoreductase
is similar to:
PaperBLAST

GOLD_LISIN / Q92EU6: NAD-dependent glycerol dehydrogenase; Dha-forming NAD-dependent glycerol dehydrogenase; EC 1.1.1.6 from Listeria innocua

30% id,
78% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 7 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory