Curated BLAST for Genomes

 

Curated BLAST

Searching in Gracilibacillus halophilus YIM-C55.5 (GCF_000359605.1)

Found 8 curated entries in PaperBLAST's database that match '1.1.1.140' as complete word(s).

These curated entries have 5 distinct sequences.

Running ublast with E ≤ 0.01

Found 10 relevant proteins in Gracilibacillus halophilus YIM-C55.5, or try another query

fabG J416_RS00905 J416_00979 WP_003462994.1: 3-oxoacyl-[acyl-carrier-protein] reductase
is similar to:
PaperBLAST

BWI76_RS22230: Sorbitol-6-phosphate 2-dehydrogenase (EC 1.1.1.140) from Klebsiella michiganensis

36% id,
100% cov

SRLD_ECOLI / P05707: Sorbitol-6-phosphate 2-dehydrogenase; Glucitol-6-phosphate dehydrogenase; Ketosephosphate reductase; EC 1.1.1.140 from Escherichia coli
GutD / b2705: sorbitol-6-phosphate 2-dehydrogenase (EC 1.1.1.140) from Escherichia coli
srlD: sorbitol-6-phosphate dehydrogenase; EC 1.1.1.140 from Escherichia coli
srlD / P05707: sorbitol-6-phosphate 2-dehydrogenase (EC 1.1.1.140) from Escherichia coli

35% id,
100% cov

BWI76_RS01745: Sorbitol-6-phosphate 2-dehydrogenase (EC 1.1.1.140) from Klebsiella michiganensis

34% id,
96% cov

More...

J416_RS04110 J416_04396 WP_003465757.1: SDR family oxidoreductase
is similar to:
PaperBLAST

srlD / Q9X671: sorbitol-6-phosphate dehydrogenase subunit (EC 1.1.1.140) from Streptococcus mutans

35% id,
99% cov

BWI76_RS01745: Sorbitol-6-phosphate 2-dehydrogenase (EC 1.1.1.140) from Klebsiella michiganensis

34% id,
98% cov

SRLD_ECOLI / P05707: Sorbitol-6-phosphate 2-dehydrogenase; Glucitol-6-phosphate dehydrogenase; Ketosephosphate reductase; EC 1.1.1.140 from Escherichia coli
GutD / b2705: sorbitol-6-phosphate 2-dehydrogenase (EC 1.1.1.140) from Escherichia coli
srlD: sorbitol-6-phosphate dehydrogenase; EC 1.1.1.140 from Escherichia coli
srlD / P05707: sorbitol-6-phosphate 2-dehydrogenase (EC 1.1.1.140) from Escherichia coli

29% id,
99% cov

More...

kduD J416_RS09900 J416_10446 WP_003469955.1: 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase KduD
is similar to:
PaperBLAST

srlD / Q9X671: sorbitol-6-phosphate dehydrogenase subunit (EC 1.1.1.140) from Streptococcus mutans

32% id,
98% cov

BWI76_RS01745: Sorbitol-6-phosphate 2-dehydrogenase (EC 1.1.1.140) from Klebsiella michiganensis

30% id,
97% cov

J416_RS11750 J416_12377 WP_003472283.1: SDR family NAD(P)-dependent oxidoreductase
is similar to:
PaperBLAST

BWI76_RS01745: Sorbitol-6-phosphate 2-dehydrogenase (EC 1.1.1.140) from Klebsiella michiganensis

32% id,
97% cov

D4I194: sorbitol-6-phosphate 2-dehydrogenase (EC 1.1.1.140) from Erwinia amylovora

28% id,
98% cov

BWI76_RS22230: Sorbitol-6-phosphate 2-dehydrogenase (EC 1.1.1.140) from Klebsiella michiganensis

28% id,
98% cov

More...

J416_RS11525 J416_12137 WP_003472125.1: SDR family oxidoreductase
is similar to:
PaperBLAST

BWI76_RS01745: Sorbitol-6-phosphate 2-dehydrogenase (EC 1.1.1.140) from Klebsiella michiganensis

30% id,
97% cov

J416_RS09200 J416_09719 WP_003469185.1: SDR family oxidoreductase
is similar to:
PaperBLAST

BWI76_RS01745: Sorbitol-6-phosphate 2-dehydrogenase (EC 1.1.1.140) from Klebsiella michiganensis

28% id,
99% cov

J416_RS01480 J416_01584 WP_003463368.1: SDR family oxidoreductase
is similar to:
PaperBLAST

BWI76_RS01745: Sorbitol-6-phosphate 2-dehydrogenase (EC 1.1.1.140) from Klebsiella michiganensis

27% id,
97% cov

srlD / Q9X671: sorbitol-6-phosphate dehydrogenase subunit (EC 1.1.1.140) from Streptococcus mutans

25% id,
96% cov

J416_RS07610 J416_08052 WP_003467859.1: bifunctional rhamnulose-1-phosphate aldolase/short-chain dehydrogenase
is similar to:
PaperBLAST

BWI76_RS01745: Sorbitol-6-phosphate 2-dehydrogenase (EC 1.1.1.140) from Klebsiella michiganensis

27% id,
97% cov

J416_RS05700 J416_06003 WP_003466622.1: SDR family oxidoreductase
is similar to:
PaperBLAST

BWI76_RS01745: Sorbitol-6-phosphate 2-dehydrogenase (EC 1.1.1.140) from Klebsiella michiganensis

26% id,
97% cov

SRLD_ECOLI / P05707: Sorbitol-6-phosphate 2-dehydrogenase; Glucitol-6-phosphate dehydrogenase; Ketosephosphate reductase; EC 1.1.1.140 from Escherichia coli
GutD / b2705: sorbitol-6-phosphate 2-dehydrogenase (EC 1.1.1.140) from Escherichia coli
srlD: sorbitol-6-phosphate dehydrogenase; EC 1.1.1.140 from Escherichia coli
srlD / P05707: sorbitol-6-phosphate 2-dehydrogenase (EC 1.1.1.140) from Escherichia coli

30% id,
83% cov

BWI76_RS22230: Sorbitol-6-phosphate 2-dehydrogenase (EC 1.1.1.140) from Klebsiella michiganensis

29% id,
83% cov

More...

J416_RS09640 J416_10176 WP_003469769.1: SDR family oxidoreductase
is similar to:
PaperBLAST

srlD / Q9X671: sorbitol-6-phosphate dehydrogenase subunit (EC 1.1.1.140) from Streptococcus mutans

30% id,
60% cov

BWI76_RS01745: Sorbitol-6-phosphate 2-dehydrogenase (EC 1.1.1.140) from Klebsiella michiganensis

28% id,
59% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 10 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory