Curated BLAST for Genomes

 

Curated BLAST

Searching in Gracilibacillus halophilus YIM-C55.5 (GCF_000359605.1)

Found 27 curated entries in PaperBLAST's database that match '1.2.1.26' as complete word(s).

These curated entries have 19 distinct sequences.

Running ublast with E ≤ 0.01

Found 4 relevant proteins in Gracilibacillus halophilus YIM-C55.5, or try another query

betB J416_RS13265 J416_13951 WP_003473525.1: betaine-aldehyde dehydrogenase
is similar to:
PaperBLAST

SM_b20891: Ketoglutarate semialdehyde dehydrogenase (EC 1.2.1.26) from Sinorhizobium meliloti

39% id,
99% cov

KGSDH_HALVD / D4GP41: Alpha-ketoglutarate semialdehyde dehydrogenase; KGSADH; EC 1.2.1.26 from Haloferax volcanii
xacF / D4GP41: α-ketoglutarate semialdehyde dehydrogenase subunit (EC 1.2.1.26) from Haloferax volcanii

38% id,
98% cov

KGSDH_BACSU / P42236: Alpha-ketoglutaric semialdehyde dehydrogenase; alphaKGSA dehydrogenase; 2,5-dioxovalerate dehydrogenase; EC 1.2.1.26 from Bacillus subtilis

36% id,
98% cov

More...

J416_RS11040 J416_11637 WP_003471449.1: aldehyde dehydrogenase family protein
is similar to:
PaperBLAST

KGSDH_SACS2 / Q97UA1: 2,5-dioxopentanoate dehydrogenase; DopDH; Aldehyde dehydrogenase T; Alpha-ketoglutaric semialdehyde dehydrogenase AldhT; EC 1.2.1.26 from Saccharolobus solfataricus
dopDH / Q97UA1: 2,5-dioxopentanoate dehydrogenase subunit (EC 1.2.1.26) from Saccharolobus solfataricus
Q97UA1: lactaldehyde dehydrogenase (EC 1.2.1.22); 2,5-dioxovalerate dehydrogenase (EC 1.2.1.26) from Saccharolobus solfataricus

35% id,
97% cov

KGSDH_HALVD / D4GP41: Alpha-ketoglutarate semialdehyde dehydrogenase; KGSADH; EC 1.2.1.26 from Haloferax volcanii
xacF / D4GP41: α-ketoglutarate semialdehyde dehydrogenase subunit (EC 1.2.1.26) from Haloferax volcanii

36% id,
94% cov

SM_b20891: Ketoglutarate semialdehyde dehydrogenase (EC 1.2.1.26) from Sinorhizobium meliloti

34% id,
97% cov

More...

J416_RS06115 J416_06440 WP_003466863.1: aldehyde dehydrogenase family protein
is similar to:
PaperBLAST

KGSDH_BACSU / P42236: Alpha-ketoglutaric semialdehyde dehydrogenase; alphaKGSA dehydrogenase; 2,5-dioxovalerate dehydrogenase; EC 1.2.1.26 from Bacillus subtilis

34% id,
99% cov

Pf1N1B4_1109: 2-ketoglutaric semialdehyde dehydrogenase (EC 1.2.1.26) from Pseudomonas fluorescens

32% id,
97% cov

KGSDH_HALVD / D4GP41: Alpha-ketoglutarate semialdehyde dehydrogenase; KGSADH; EC 1.2.1.26 from Haloferax volcanii
xacF / D4GP41: α-ketoglutarate semialdehyde dehydrogenase subunit (EC 1.2.1.26) from Haloferax volcanii

32% id,
98% cov

More...

J416_RS14675 J416_15467 WP_083875613.1: aldehyde dehydrogenase family protein
is similar to:
PaperBLAST

Pf1N1B4_1109: 2-ketoglutaric semialdehyde dehydrogenase (EC 1.2.1.26) from Pseudomonas fluorescens

34% id,
96% cov

PS417_04200: 2-ketoglutaric semialdehyde dehydrogenase (EC 1.2.1.26) from Pseudomonas simiae

33% id,
98% cov

KGSDH_BACSU / P42236: Alpha-ketoglutaric semialdehyde dehydrogenase; alphaKGSA dehydrogenase; 2,5-dioxovalerate dehydrogenase; EC 1.2.1.26 from Bacillus subtilis

33% id,
96% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 4 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory