Curated BLAST for Genomes

 

Curated BLAST

Searching in Gracilibacillus halophilus YIM-C55.5 (GCF_000359605.1)

Found 19 curated entries in PaperBLAST's database that match '2.7.7.12' as complete word(s).

These curated entries have 14 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Gracilibacillus halophilus YIM-C55.5, or try another query

galT J416_RS03825 J416_04086 WP_003465239.1: UDP-glucose--hexose-1-phosphate uridylyltransferase
is similar to:
PaperBLAST

M4M7K7: UDP-glucose-hexose-1-phosphate uridylyltransferase (EC 2.7.7.12) from Bifidobacterium bifidum

31% id,
94% cov

GALT_BIFL2 / E8MF11: Galactose-1-phosphate uridylyltransferase; Gal-1-P uridylyltransferase; UDP-glucose--hexose-1-phosphate uridylyltransferase; EC 2.7.7.12 from Bifidobacterium longum

29% id,
97% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

66378-67886 (frame +3) on NZ_APML01000016.1 Gracilibacillus halophilus YIM-C55.5 contig_16, whole genome shotgun sequence
is similar to:
PaperBLAST

M4M7K7: UDP-glucose-hexose-1-phosphate uridylyltransferase (EC 2.7.7.12) from Bifidobacterium bifidum
Also see hits to annotated proteins above

31% id,
96% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory