Curated BLAST for Genomes

 

Curated BLAST

Searching in Gracilibacillus halophilus YIM-C55.5 (GCF_000359605.1)

Found 37 curated entries in PaperBLAST's database that match '3.5.1.25' as complete word(s).

These curated entries have 28 distinct sequences.

Running ublast with E ≤ 0.01

Found 4 relevant proteins in Gracilibacillus halophilus YIM-C55.5, or try another query

nagA J416_RS03840 J416_04101 WP_003465246.1: N-acetylglucosamine-6-phosphate deacetylase
is similar to:
PaperBLAST

NAGA_BACSU / O34450: N-acetylglucosamine-6-phosphate deacetylase; GlcNAc 6-P deacetylase; EC 3.5.1.25 from Bacillus subtilis
CAB15506.1: N-acetylglucosamine 6-phosphate deacetylase (NagA;BSU35010) (EC 3.5.1.25)

51% id,
97% cov

NAGA_LYSSH / Q84F86: N-acetylglucosamine-6-phosphate deacetylase; GlcNAc 6-P deacetylase; EC 3.5.1.25 from Lysinibacillus sphaericus

44% id,
98% cov

Q8Y8E8: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) from Listeria monocytogenes

39% id,
99% cov

More...

phnM J416_RS14485 J416_15257 WP_003474801.1: phosphonate metabolism protein PhnM
is similar to:
PaperBLAST

Sama_0946: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) from Shewanella amazonensis

29% id,
25% cov

SO3505: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) from Shewanella oneidensis

30% id,
17% cov

AAC44683.1: N-acetylglucosamine 6-phosphate deacetylase (EC 3.5.1.25)

33% id,
14% cov

More...

ade J416_RS03920 J416_04191 WP_003465293.1: adenine deaminase
is similar to:
PaperBLAST

agaA / Q8XAC3: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) from Escherichia coli

39% id,
14% cov

Q8DN83: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) from Streptococcus pneumoniae

34% id,
15% cov

J416_RS01065 J416_01154 WP_003463102.1: dihydroorotase
is similar to:
PaperBLAST

NAGA_LYSSH / Q84F86: N-acetylglucosamine-6-phosphate deacetylase; GlcNAc 6-P deacetylase; EC 3.5.1.25 from Lysinibacillus sphaericus

28% id,
16% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 4 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory