Curated BLAST for Genomes

 

Curated BLAST

Searching in Gracilibacillus halophilus YIM-C55.5 (GCF_000359605.1)

Found 3 curated entries in PaperBLAST's database that match '5.1.2.7' as complete word(s).

These curated entries have 1 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Gracilibacillus halophilus YIM-C55.5, or try another query

J416_RS09955 J416_10501 WP_003470005.1: tagaturonate epimerase family protein
is similar to:
PaperBLAST

UXAE_THEMA / Q9WYS1: Tagaturonate/fructuronate epimerase; D-TagA/D-FruA epimerase; EC 5.1.2.7 from Thermotoga maritima
uxaE / Q9WYS1: D-tagaturonate epimerase monomer (EC 5.1.2.7) from Thermotoga maritima
Q9WYS1: tagaturonate epimerase (EC 5.1.2.7) from Thermotoga maritima

43% id,
96% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory