Curated BLAST for Genomes

 

Curated BLAST

Searching in Rhizobium freirei PRF 81 (GCF_000359745.1)

Found 41 curated entries in PaperBLAST's database that match '2.7.1.2' as complete word(s).

These curated entries have 33 distinct sequences.

Running ublast with E ≤ 0.01

Found 13 relevant proteins in Rhizobium freirei PRF 81, or try another query

RHSP_RS30180 WP_037155368.1: glucokinase
is similar to:
PaperBLAST

PS417_22685: Glucokinase (EC 2.7.1.2) from Pseudomonas simiae

39% id,
96% cov

GLK_ECOLI / P0A6V8: Glucokinase; Glucose kinase; EC 2.7.1.2 from Escherichia coli
Glk / b2388: glucokinase (EC 2.7.1.1; EC 2.7.1.2; EC 2.7.1.8) from Escherichia coli

37% id,
97% cov

Dshi_1655: glucokinase (EC 2.7.1.2) from Dinoroseobacter shibae

34% id,
96% cov

More...

RHSP_RS13800 RHSP_44237 WP_004117842.1: ROK family protein
is similar to:
PaperBLAST

Sama_2231: glucokinase (EC 2.7.1.2) from Shewanella amazonensis

35% id,
98% cov

B1VZT1: glucokinase (EC 2.7.1.2) from Streptomyces griseus

29% id,
99% cov

Sama_1405: glucokinase (EC 2.7.1.2) from Shewanella amazonensis

31% id,
94% cov

More...

RHSP_RS25550 RHSP_53685 WP_004125319.1: ROK family protein
is similar to:
PaperBLAST

Q8RDE9: glucokinase (EC 2.7.1.2) from Caldanaerobacter subterraneus

32% id,
97% cov

GLK_STRCO / P0A4E1: Glucokinase; Glucose kinase; ORF 3; EC 2.7.1.2 from Streptomyces coelicolor
glkA: glucokinase; EC 2.7.1.2 from Streptomyces coelicolor
P0A4E1: glucokinase (EC 2.7.1.2) from Streptomyces coelicolor

32% id,
97% cov

GLK_THEMA / Q9X1I0: Glucokinase; ATP-dependent glucokinase; ATP-GLK; Glucose kinase; EC 2.7.1.2 from Thermotoga maritima

32% id,
96% cov

More...

RHSP_RS06555 RHSP_23738 WP_004110897.1: ROK family transcriptional regulator
is similar to:
PaperBLAST

glk: glucokinase; EC 2.7.1.2 from Bacillus megaterium
O31392: glucokinase (EC 2.7.1.2) from Priestia megaterium

30% id,
98% cov

GLK_THEMA / Q9X1I0: Glucokinase; ATP-dependent glucokinase; ATP-GLK; Glucose kinase; EC 2.7.1.2 from Thermotoga maritima

27% id,
96% cov

B1VZT1: glucokinase (EC 2.7.1.2) from Streptomyces griseus

26% id,
98% cov

More...

RHSP_RS25870 RHSP_52834 WP_037154470.1: ROK family transcriptional regulator
is similar to:
PaperBLAST

GLK_BACSU / P54495: Glucokinase; Glucose kinase; EC 2.7.1.2 from Bacillus subtilis
P54495: glucokinase (EC 2.7.1.2) from Bacillus subtilis

29% id,
99% cov

glcK / GI|1303865: glucokinase; EC 2.7.1.2 from Bacillus subtilis

29% id,
99% cov

GLK_THEMA / Q9X1I0: Glucokinase; ATP-dependent glucokinase; ATP-GLK; Glucose kinase; EC 2.7.1.2 from Thermotoga maritima

28% id,
98% cov

More...

RHSP_RS16295 RHSP_30667 WP_004119317.1: ROK family transcriptional regulator
is similar to:
PaperBLAST

GLK_STRCO / P0A4E1: Glucokinase; Glucose kinase; ORF 3; EC 2.7.1.2 from Streptomyces coelicolor
glkA: glucokinase; EC 2.7.1.2 from Streptomyces coelicolor
P0A4E1: glucokinase (EC 2.7.1.2) from Streptomyces coelicolor

29% id,
93% cov

Q8RDE9: glucokinase (EC 2.7.1.2) from Caldanaerobacter subterraneus

30% id,
90% cov

B1VZT1: glucokinase (EC 2.7.1.2) from Streptomyces griseus

28% id,
94% cov

More...

RHSP_RS08035 RHSP_23934 WP_004112704.1: ROK family transcriptional regulator
is similar to:
PaperBLAST

Q8RDE9: glucokinase (EC 2.7.1.2) from Caldanaerobacter subterraneus

28% id,
96% cov

glcK / GI|1303865: glucokinase; EC 2.7.1.2 from Bacillus subtilis

28% id,
91% cov

GLK_BACSU / P54495: Glucokinase; Glucose kinase; EC 2.7.1.2 from Bacillus subtilis
P54495: glucokinase (EC 2.7.1.2) from Bacillus subtilis

28% id,
91% cov

More...

RHSP_RS24870 WP_037154307.1: ROK family protein
is similar to:
PaperBLAST

GLK_THEMA / Q9X1I0: Glucokinase; ATP-dependent glucokinase; ATP-GLK; Glucose kinase; EC 2.7.1.2 from Thermotoga maritima

27% id,
96% cov

glcK / GI|1303865: glucokinase; EC 2.7.1.2 from Bacillus subtilis

25% id,
97% cov

GLK_BACSU / P54495: Glucokinase; Glucose kinase; EC 2.7.1.2 from Bacillus subtilis
P54495: glucokinase (EC 2.7.1.2) from Bacillus subtilis

25% id,
97% cov

More...

RHSP_RS08230 RHSP_00443 WP_240535390.1: ROK family protein
is similar to:
PaperBLAST

GLK_STRCO / P0A4E1: Glucokinase; Glucose kinase; ORF 3; EC 2.7.1.2 from Streptomyces coelicolor
glkA: glucokinase; EC 2.7.1.2 from Streptomyces coelicolor
P0A4E1: glucokinase (EC 2.7.1.2) from Streptomyces coelicolor

28% id,
94% cov

GLK_THEMA / Q9X1I0: Glucokinase; ATP-dependent glucokinase; ATP-GLK; Glucose kinase; EC 2.7.1.2 from Thermotoga maritima

24% id,
92% cov

RHSP_RS11900 RHSP_51301 WP_004116889.1: ROK family transcriptional regulator
is similar to:
PaperBLAST

GLK_THEMA / Q9X1I0: Glucokinase; ATP-dependent glucokinase; ATP-GLK; Glucose kinase; EC 2.7.1.2 from Thermotoga maritima

26% id,
98% cov

RHSP_RS18805 RHSP_19679 WP_004120954.1: ROK family transcriptional regulator
is similar to:
PaperBLAST

GLK_THEMA / Q9X1I0: Glucokinase; ATP-dependent glucokinase; ATP-GLK; Glucose kinase; EC 2.7.1.2 from Thermotoga maritima

26% id,
96% cov

glk: glucokinase; EC 2.7.1.2 from Bacillus megaterium
O31392: glucokinase (EC 2.7.1.2) from Priestia megaterium

26% id,
52% cov

Q8RDE9: glucokinase (EC 2.7.1.2) from Caldanaerobacter subterraneus

26% id,
50% cov

More...

RHSP_RS23230 WP_037153943.1: ROK family protein
is similar to:
PaperBLAST

B1VZT1: glucokinase (EC 2.7.1.2) from Streptomyces griseus

24% id,
98% cov

GLK_AERPE / Q9YA47: Glucokinase; ATP-dependent glucokinase; ATP-GLK; Glucose kinase; EC 2.7.1.2 from Aeropyrum pernix

31% id,
48% cov

Q8RDE9: glucokinase (EC 2.7.1.2) from Caldanaerobacter subterraneus

30% id,
47% cov

More...

RHSP_RS29470 RHSP_23176 WP_004127650.1: ROK family transcriptional regulator
is similar to:
PaperBLAST

glk: glucokinase; EC 2.7.1.2 from Bacillus megaterium
O31392: glucokinase (EC 2.7.1.2) from Priestia megaterium

25% id,
84% cov

glcK / GI|1303865: glucokinase; EC 2.7.1.2 from Bacillus subtilis

25% id,
72% cov

GLK_BACSU / P54495: Glucokinase; Glucose kinase; EC 2.7.1.2 from Bacillus subtilis
P54495: glucokinase (EC 2.7.1.2) from Bacillus subtilis

25% id,
72% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 13 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory