Curated BLAST

Curated BLAST for Genomes

Curated BLAST

Searching in Methylosarcina fibrata AML-C10 (GCF_000372865.1)

Found 75 curated entries in PaperBLAST's database that match '2.6.1.42' as complete word(s).

These curated entries have 59 distinct sequences.

Running ublast with E ≤ 0.01

Found 5 relevant proteins in Methylosarcina fibrata AML-C10, or try another query

A3OW_RS0111485 WP_020563587.1: branched-chain amino acid transaminase is similar to:	PaperBLAST
Psest_0450: Branched-chain amino acid aminotransferase (EC 2.6.1.42) from Pseudomonas stutzeri	70% id, 100% cov
ilvE / O86428: branched-chain-amino-acid aminotransferase subunit (EC 2.6.1.6; EC 2.6.1.42) from Pseudomonas aeruginosa O86428: branched-chain-amino-acid transaminase (EC 2.6.1.42) from Pseudomonas aeruginosa	69% id, 100% cov
BPHYT_RS16285: Branched-chain amino acid aminotransferase (EC 2.6.1.42) from Burkholderia phytofirmans	60% id, 100% cov
ilvE / O27481: branched-chain-amino-acid aminotransferase subunit (EC 2.6.1.42) from Methanothermobacter thermautotrophicus	48% id, 99% cov
IlvE / b3770: branched-chain-amino-acid aminotransferase (EC 2.6.1.1; EC 2.6.1.57; EC 2.6.1.27; EC 2.6.1.42; EC 2.6.1.6) from Escherichia coli ilvE / RF\|YP_026247: branched-chain-amino-acid aminotransferase; EC 2.6.1.42 from Escherichia coli ilvE / P0AB80: branched-chain-amino-acid aminotransferase (EC 2.6.1.1; EC 2.6.1.42; EC 2.6.1.6) from Escherichia coli	46% id, 99% cov
F2L0W0: branched-chain-amino-acid transaminase (EC 2.6.1.42) from Thermoproteus uzoniensis	44% id, 99% cov
N515DRAFT_2015: Branched-chain amino acid aminotransferase (EC 2.6.1.42) from Dyella japonica	44% id, 97% cov
F0QW25: branched-chain-amino-acid transaminase (EC 2.6.1.42) from Vulcanisaeta moutnovskia	45% id, 95% cov
ilvE / A6UWA0: branched-chain amino acid aminotransferase subunit (EC 2.6.1.6; EC 2.6.1.42) from Methanococcus aeolicus A6UWA0: branched-chain-amino-acid transaminase (EC 2.6.1.42) from Methanococcus aeolicus	43% id, 94% cov
GB\|AAU18968.1: branched-chain amino acid aminotransferase 2; EC 2.6.1.42 from Bacillus cereus	41% id, 91% cov
A0A1B1L2T7: branched-chain-amino-acid transaminase (EC 2.6.1.42) from Bacillus thuringiensis	40% id, 91% cov
B9L0B7: branched-chain-amino-acid transaminase (EC 2.6.1.42) from Thermomicrobium roseum	37% id, 94% cov
D1CCW1: branched-chain-amino-acid transaminase (EC 2.6.1.42) from Thermobaculum terrenum	35% id, 98% cov
E6TUA8: branched-chain-amino-acid transaminase (EC 2.6.1.42) from Evansella cellulosilytica	38% id, 90% cov
P54691: branched-chain-amino-acid transaminase (EC 2.6.1.42); glutamate-prephenate aminotransferase (EC 2.6.1.79) from Synechocystis sp.	35% id, 96% cov
D0LR31: branched-chain-amino-acid transaminase (EC 2.6.1.42) from Haliangium ochraceum	33% id, 94% cov
ILVE1_BACSU / O31461: Branched-chain-amino-acid transaminase 1; BCAT 1; EC 2.6.1.42 from Bacillus subtilis ilvE / O31461: branched-chain amino acid aminotransferase (EC 2.6.1.6; EC 2.6.1.42) from Bacillus subtilis	30% id, 91% cov
RR42_RS25890: Branched-chain amino acid aminotransferase (EC 2.6.1.42) from Cupriavidus basilensis	30% id, 89% cov
A0A2Z4MEX9: branched-chain-amino-acid transaminase (EC 2.6.1.42) from Brevibacillus brevis	30% id, 91% cov
Q5FTR3: branched-chain-amino-acid transaminase (EC 2.6.1.42) from Gluconobacter oxydans	29% id, 83% cov
Q9LE06: branched-chain-amino-acid transaminase (EC 2.6.1.42); methionine transaminase (EC 2.6.1.88) from Arabidopsis thaliana	27% id, 88% cov
Q9LPM9: branched-chain-amino-acid transaminase (EC 2.6.1.42) from Arabidopsis thaliana	27% id, 87% cov
Q9FYA6: branched-chain-amino-acid transaminase (EC 2.6.1.42) from Arabidopsis thaliana	29% id, 75% cov
BCAT3_ARATH / Q9M401: Branched-chain-amino-acid aminotransferase 3, chloroplastic; Atbcat-3; EC 2.6.1.42; EC 2.6.1.88 from Arabidopsis thaliana Q9M401: branched-chain-amino-acid transaminase (EC 2.6.1.42) from Arabidopsis thaliana	30% id, 69% cov
BCAT2_ARATH / Q9M439: Branched-chain-amino-acid aminotransferase 2, chloroplastic; Atbcat-2; EC 2.6.1.42 from Arabidopsis thaliana Q9M439: branched-chain-amino-acid transaminase (EC 2.6.1.42) from Arabidopsis thaliana	28% id, 74% cov
A0A0A0KG15: branched-chain-amino-acid transaminase (EC 2.6.1.42) from Cucumis sativus	29% id, 70% cov
B6RFK8: branched-chain-amino-acid transaminase (EC 2.6.1.42) from Nicotiana benthamiana	29% id, 68% cov
A0A0A0LN48: branched-chain-amino-acid transaminase (EC 2.6.1.42) from Cucumis sativus	27% id, 62% cov
A0A0A0LJI6: branched-chain-amino-acid transaminase (EC 2.6.1.42) from Cucumis sativus	33% id, 50% cov
Q93Y32: branched-chain-amino-acid transaminase (EC 2.6.1.42) from Arabidopsis thaliana	30% id, 40% cov
BCAT1_HUMLU / K7QKH1: Branched-chain amino acid aminotransferase 1, mitochondrial; HlBCAT1; EC 2.6.1.42 from Humulus lupulus	31% id, 39% cov
BCAT2_HUMLU / K7QHS5: Branched-chain amino acid aminotransferase 2, chloroplastic; HlBCAT2; EC 2.6.1.42 from Humulus lupulus	32% id, 37% cov
More...

A3OW_RS0103225 WP_020561990.1: D-amino acid aminotransferase is similar to:	PaperBLAST
A0A1B1L2T7: branched-chain-amino-acid transaminase (EC 2.6.1.42) from Bacillus thuringiensis	33% id, 95% cov
GB\|AAU18968.1: branched-chain amino acid aminotransferase 2; EC 2.6.1.42 from Bacillus cereus	32% id, 95% cov
E6TUA8: branched-chain-amino-acid transaminase (EC 2.6.1.42) from Evansella cellulosilytica	30% id, 93% cov
ilvE / A6UWA0: branched-chain amino acid aminotransferase subunit (EC 2.6.1.6; EC 2.6.1.42) from Methanococcus aeolicus A6UWA0: branched-chain-amino-acid transaminase (EC 2.6.1.42) from Methanococcus aeolicus	29% id, 98% cov
ilvE / O27481: branched-chain-amino-acid aminotransferase subunit (EC 2.6.1.42) from Methanothermobacter thermautotrophicus	31% id, 89% cov
F2L0W0: branched-chain-amino-acid transaminase (EC 2.6.1.42) from Thermoproteus uzoniensis	28% id, 94% cov
F0QW25: branched-chain-amino-acid transaminase (EC 2.6.1.42) from Vulcanisaeta moutnovskia	28% id, 87% cov
BPHYT_RS16285: Branched-chain amino acid aminotransferase (EC 2.6.1.42) from Burkholderia phytofirmans	28% id, 89% cov
Q9LE06: branched-chain-amino-acid transaminase (EC 2.6.1.42); methionine transaminase (EC 2.6.1.88) from Arabidopsis thaliana	21% id, 74% cov
IlvE / b3770: branched-chain-amino-acid aminotransferase (EC 2.6.1.1; EC 2.6.1.57; EC 2.6.1.27; EC 2.6.1.42; EC 2.6.1.6) from Escherichia coli ilvE / RF\|YP_026247: branched-chain-amino-acid aminotransferase; EC 2.6.1.42 from Escherichia coli ilvE / P0AB80: branched-chain-amino-acid aminotransferase (EC 2.6.1.1; EC 2.6.1.42; EC 2.6.1.6) from Escherichia coli	39% id, 40% cov
P54691: branched-chain-amino-acid transaminase (EC 2.6.1.42); glutamate-prephenate aminotransferase (EC 2.6.1.79) from Synechocystis sp.	36% id, 37% cov
ILVE_MYCTU / P9WQ75: Branched-chain-amino-acid aminotransferase; BCAT; EC 2.6.1.42 from Mycobacterium tuberculosis P9WQ75: branched-chain-amino-acid transaminase (EC 2.6.1.42) from Mycobacterium tuberculosis	31% id, 36% cov
ILVE_MYCS2 / A0R066: Branched-chain-amino-acid aminotransferase; BCAT; EC 2.6.1.42 from Mycolicibacterium smegmatis A0R066: branched-chain-amino-acid transaminase (EC 2.6.1.42) from Mycolicibacterium smegmatis	30% id, 36% cov
ILVE2_BACSU / P39576: Branched-chain-amino-acid aminotransferase 2; BCAT 2; Vegetative protein 85; VEG85; EC 2.6.1.42 from Bacillus subtilis ilvK / P39576: branched-chain amino acid aminotransferase (EC 2.6.1.42; EC 2.6.1.6) from Bacillus subtilis	24% id, 44% cov
Q5FTR3: branched-chain-amino-acid transaminase (EC 2.6.1.42) from Gluconobacter oxydans	28% id, 34% cov
More...

pabC A3OW_RS0109885 WP_020563279.1: aminodeoxychorismate lyase is similar to:	PaperBLAST
A0A1B1L2T7: branched-chain-amino-acid transaminase (EC 2.6.1.42) from Bacillus thuringiensis	31% id, 95% cov
GB\|AAU18968.1: branched-chain amino acid aminotransferase 2; EC 2.6.1.42 from Bacillus cereus	31% id, 95% cov
E6TUA8: branched-chain-amino-acid transaminase (EC 2.6.1.42) from Evansella cellulosilytica	27% id, 93% cov
A0A0A0LN48: branched-chain-amino-acid transaminase (EC 2.6.1.42) from Cucumis sativus	26% id, 70% cov
Q70KX9: branched-chain-amino-acid transaminase (EC 2.6.1.42) from Hordeum vulgare	26% id, 64% cov
More...

A3OW_RS0107000 WP_020562716.1: pyridoxal phosphate-dependent aminotransferase is similar to:	PaperBLAST
A0A060PQX5: branched-chain-amino-acid transaminase (EC 2.6.1.42) from Thermococcus sp.	23% id, 97% cov

dapC A3OW_RS0117800 WP_020564809.1: succinyldiaminopimelate transaminase is similar to:	PaperBLAST
BWI76_RS24235: Branched-chain-amino-acid transaminase (EC 2.6.1.42) from Klebsiella michiganensis	24% id, 89% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 5 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

4286581-4287828 (frame +1) on NZ_KB889965.1 Methylosarcina fibrata AML-C10 A3OWDRAFT_scaffold1.1, whole genome shotgun sequence is similar to:	PaperBLAST
A0A060PQX5: branched-chain-amino-acid transaminase (EC 2.6.1.42) from Thermococcus sp. Also see hits to annotated proteins above	23% id, 93% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory