Curated BLAST for Genomes

 

Curated BLAST

Searching in Methylosarcina fibrata AML-C10 (GCF_000372865.1)

Found 11 curated entries in PaperBLAST's database that match '4.2.1.90' as complete word(s).

These curated entries have 7 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Methylosarcina fibrata AML-C10, or try another query

A3OW_RS0120735 WP_020565374.1: enolase C-terminal domain-like protein
is similar to:
PaperBLAST

RHMD_SALTY / Q8ZNF9: L-rhamnonate dehydratase; RhamD; EC 4.2.1.90 from Salmonella typhimurium
Q8ZNF9: L-rhamnonate dehydratase (EC 4.2.1.90) from Salmonella enterica

25% id,
86% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory