Curated BLAST for Genomes

 

Curated BLAST

Searching in Desulfovibrio oxyclinae DSM 11498 (GCF_000375485.1)

Found 32 curated entries in PaperBLAST's database that match '2.6.1.44' as complete word(s).

These curated entries have 23 distinct sequences.

Running ublast with E ≤ 0.01

Found 10 relevant proteins in Desulfovibrio oxyclinae DSM 11498, or try another query

B149_RS0111845 WP_018125377.1: aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme
is similar to:
PaperBLAST

D2Z0I0: alanine-glyoxylate transaminase (EC 2.6.1.44) from Hydrogenobacter thermophilus

55% id,
97% cov

aspC / Q4FNY9: alanine—glyoxylate transaminase (EC 2.6.1.44) from Pelagibacter ubique

27% id,
96% cov

B149_RS0110945 WP_018125202.1: LL-diaminopimelate aminotransferase
is similar to:
PaperBLAST

D2Z0I0: alanine-glyoxylate transaminase (EC 2.6.1.44) from Hydrogenobacter thermophilus

40% id,
98% cov

aspC / Q4FNY9: alanine—glyoxylate transaminase (EC 2.6.1.44) from Pelagibacter ubique

29% id,
99% cov

B149_RS0115315 WP_018126051.1: pyridoxal phosphate-dependent aminotransferase
is similar to:
PaperBLAST

aspC / Q4FNY9: alanine—glyoxylate transaminase (EC 2.6.1.44) from Pelagibacter ubique

36% id,
100% cov

D2Z0I0: alanine-glyoxylate transaminase (EC 2.6.1.44) from Hydrogenobacter thermophilus

28% id,
96% cov

B149_RS0100510 WP_018123199.1: pyridoxal phosphate-dependent aminotransferase
is similar to:
PaperBLAST

aspC / Q4FNY9: alanine—glyoxylate transaminase (EC 2.6.1.44) from Pelagibacter ubique

31% id,
100% cov

D2Z0I0: alanine-glyoxylate transaminase (EC 2.6.1.44) from Hydrogenobacter thermophilus

28% id,
98% cov

B149_RS0110790 WP_018125191.1: aspartate aminotransferase family protein
is similar to:
PaperBLAST

AGT22_ARATH / Q94AL9: Alanine--glyoxylate aminotransferase 2 homolog 2, mitochondrial; Beta-alanine-pyruvate aminotransferase 2; EC 2.6.1.44 from Arabidopsis thaliana

31% id,
86% cov

Q9SR86: beta-alanine-pyruvate transaminase (EC 2.6.1.18); alanine-glyoxylate transaminase (EC 2.6.1.44) from Arabidopsis thaliana

31% id,
85% cov

AGT21_ARATH / Q940M2: Alanine--glyoxylate aminotransferase 2 homolog 1, mitochondrial; Beta-alanine-pyruvate aminotransferase 1; EC 2.6.1.44 from Arabidopsis thaliana

29% id,
83% cov

More...

B149_RS0106510 WP_018124375.1: pyridoxal phosphate-dependent aminotransferase
is similar to:
PaperBLAST

aspC / Q4FNY9: alanine—glyoxylate transaminase (EC 2.6.1.44) from Pelagibacter ubique

27% id,
94% cov

rocD B149_RS0115240 WP_018126038.1: ornithine--oxo-acid transaminase
is similar to:
PaperBLAST

AGT22_ARATH / Q94AL9: Alanine--glyoxylate aminotransferase 2 homolog 2, mitochondrial; Beta-alanine-pyruvate aminotransferase 2; EC 2.6.1.44 from Arabidopsis thaliana

30% id,
82% cov

AGT21_ARATH / Q940M2: Alanine--glyoxylate aminotransferase 2 homolog 1, mitochondrial; Beta-alanine-pyruvate aminotransferase 1; EC 2.6.1.44 from Arabidopsis thaliana

29% id,
83% cov

Q9SR86: beta-alanine-pyruvate transaminase (EC 2.6.1.18); alanine-glyoxylate transaminase (EC 2.6.1.44) from Arabidopsis thaliana

29% id,
81% cov

More...

B149_RS0100570 WP_018123211.1: aminotransferase class V-fold PLP-dependent enzyme
is similar to:
PaperBLAST

AGT_DROME / Q9W3Z3: Alanine--glyoxylate aminotransferase; AGT; EC 2.6.1.44 from Drosophila melanogaster

26% id,
91% cov

A2V838: alanine-glyoxylate transaminase (EC 2.6.1.44) from Homo sapiens

24% id,
91% cov

AGT1_HUMAN / P21549: Alanine--glyoxylate aminotransferase; AGT; Serine--pyruvate aminotransferase; SPT; EC 2.6.1.44; EC 2.6.1.51 from Homo sapiens
AGXT1 / P21549: Serine--pyruvate aminotransferase (EC 2.6.1.44; EC 2.6.1.51) from Homo sapiens

24% id,
91% cov

More...

bioA B149_RS0113900 WP_026167619.1: adenosylmethionine--8-amino-7-oxononanoate transaminase
is similar to:
PaperBLAST

AGT21_ARATH / Q940M2: Alanine--glyoxylate aminotransferase 2 homolog 1, mitochondrial; Beta-alanine-pyruvate aminotransferase 1; EC 2.6.1.44 from Arabidopsis thaliana

27% id,
80% cov

AGT22_ARATH / Q94AL9: Alanine--glyoxylate aminotransferase 2 homolog 2, mitochondrial; Beta-alanine-pyruvate aminotransferase 2; EC 2.6.1.44 from Arabidopsis thaliana

28% id,
79% cov

AGT2_HUMAN / Q9BYV1: Alanine--glyoxylate aminotransferase 2, mitochondrial; AGT 2; (R)-3-amino-2-methylpropionate--pyruvate transaminase; Beta-ALAAT II; Beta-alanine-pyruvate aminotransferase; D-3-aminoisobutyrate-pyruvate aminotransferase; D-AIBAT; D-beta-aminoisobutyrate-pyruvate aminotransferase; EC 2.6.1.44; EC 2.6.1.40; EC 2.6.1.18 from Homo sapiens
AGXT2 / Q9BYV1: alanine--glyoxylate aminotransferase 2, mitochondrial (EC 2.6.1.44) from Homo sapiens
Q9BYV1: alanine-glyoxylate transaminase (EC 2.6.1.44) from Homo sapiens

31% id,
38% cov

More...

hemL B149_RS0114790 WP_156816849.1: glutamate-1-semialdehyde 2,1-aminomutase
is similar to:
PaperBLAST

AGT22_ARATH / Q94AL9: Alanine--glyoxylate aminotransferase 2 homolog 2, mitochondrial; Beta-alanine-pyruvate aminotransferase 2; EC 2.6.1.44 from Arabidopsis thaliana

27% id,
79% cov

Q9SR86: beta-alanine-pyruvate transaminase (EC 2.6.1.18); alanine-glyoxylate transaminase (EC 2.6.1.44) from Arabidopsis thaliana

27% id,
77% cov

AGT21_ARATH / Q940M2: Alanine--glyoxylate aminotransferase 2 homolog 1, mitochondrial; Beta-alanine-pyruvate aminotransferase 1; EC 2.6.1.44 from Arabidopsis thaliana

23% id,
82% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 10 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory