Curated BLAST for Genomes

 

Curated BLAST

Searching in Desulfovibrio oxyclinae DSM 11498 (GCF_000375485.1)

Found 29 curated entries in PaperBLAST's database that match '2.7.1.17' as complete word(s).

These curated entries have 24 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Desulfovibrio oxyclinae DSM 11498, or try another query

glpK B149_RS0113145 WP_018125630.1: glycerol kinase GlpK
is similar to:
PaperBLAST

C7NMH3: xylulokinase (EC 2.7.1.17) from Halorhabdus utahensis

30% id,
90% cov

XYLB_HUMAN / O75191: Xylulose kinase; Xylulokinase; EC 2.7.1.17 from Homo sapiens
O75191: xylulokinase (EC 2.7.1.17) from Homo sapiens

28% id,
20% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory