Searching in Desulfovibrio oxyclinae DSM 11498 (GCF_000375485.1)
Found 11 curated entries in PaperBLAST's database that match '4.1.1.48' as complete word(s).
These curated entries have 7 distinct sequences.
Running ublast with E ≤ 0.01
Found 3 relevant proteins in Desulfovibrio oxyclinae DSM 11498, or try another query
| B149_RS0102975 WP_018123676.1: indole-3-glycerol-phosphate synthase is similar to: | PaperBLAST |
P84126: indole-3-glycerol-phosphate synthase (EC 4.1.1.48) from Thermus thermophilus | 41% id, 87% cov |
trpC / Q9YGB5: indole-3-glycerol phosphate synthase (EC 4.1.1.48) from Thermococcus kodakarensis | 35% id, 96% cov |
A1KJ27: indole-3-glycerol-phosphate synthase (EC 4.1.1.48) from Mycobacterium tuberculosis | 34% id, 95% cov |
| B149_RS0102985 WP_018123678.1: aminodeoxychorismate/anthranilate synthase component II is similar to: | PaperBLAST |
TRPG_YEAST / P00937: Multifunctional tryptophan biosynthesis protein; EC 4.1.3.27; EC 4.1.1.48 from Saccharomyces cerevisiae | 42% id, 39% cov |
| B149_RS0102970 WP_018123675.1: phosphoribosylanthranilate isomerase is similar to: | PaperBLAST |
TrpC / b1262: fused indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase (EC 4.1.1.48; EC 5.3.1.24) from Escherichia coli | 33% id, 45% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 3 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
| 75361-76278 (frame -3) on NZ_AQXE01000002.1 Desulfovibrio oxyclinae DSM 11498 B149DRAFT_scaffold_1.2_C, whole genome shotgun sequence is similar to: | PaperBLAST |
TRPG_YEAST / P00937: Multifunctional tryptophan biosynthesis protein; EC 4.1.3.27; EC 4.1.1.48 from Saccharomyces cerevisiae | 40% id, 42% cov |
Lawrence Berkeley National Laboratory