Curated BLAST
Searching in Desulfovibrio oxyclinae DSM 11498 (GCF_000375485.1)
Found 17 curated entries in PaperBLAST's database that match '4.2.1.19' as complete word(s).
These curated entries have 14 distinct sequences.
Running ublast with E ≤ 0.01
Found 2 relevant proteins in Desulfovibrio oxyclinae DSM 11498, or try another query
hisB B149_RS0104715 WP_018124017.1: imidazoleglycerol-phosphate dehydratase HisB
is similar to: | PaperBLAST |
BPHYT_RS17700: imidazoleglycerol-phosphate dehydratase (EC 4.2.1.19) from Burkholderia phytofirmans | 50% id,
99% cov |
HIS7_MYCTU / P9WML9: Imidazoleglycerol-phosphate dehydratase; IGPD; EC 4.2.1.19 from Mycobacterium tuberculosis | 47% id,
96% cov |
HIS7_CRYNJ / P0CO22: Imidazoleglycerol-phosphate dehydratase; IGPD; EC 4.2.1.19 from Cryptococcus neoformans | 44% id,
99% cov |
HIS7_YEAST / P06633: Imidazoleglycerol-phosphate dehydratase; IGPD; EC 4.2.1.19 from Saccharomyces cerevisiae | 37% id,
100% cov |
his5 / GI|3116116: imidazoleglycerol-phosphate dehydratase His5; EC 4.2.1.19 from Schizosaccharomyces pombe | 42% id,
77% cov |
HIS5B_ARATH / O23346: Imidazoleglycerol-phosphate dehydratase 2, chloroplastic; IGPD 2; Protein HISTIDINE BIOSYNTHESIS 5B; EC 4.2.1.19 from Arabidopsis thaliana
O23346: imidazoleglycerol-phosphate dehydratase (EC 4.2.1.19) from Arabidopsis thaliana | 44% id,
73% cov |
HIS5A_ARATH / P34047: Imidazoleglycerol-phosphate dehydratase 1, chloroplastic; IGPD 1; Protein HISTIDINE BIOSYNTHESIS 5A; EC 4.2.1.19 from Arabidopsis thaliana
HISN5A / P34047: imidazoleglycerolphosphate dehydratase (EC 4.2.1.19) from Arabidopsis thaliana | 44% id,
73% cov |
HIS3: imidazoleglycerol-phosphate dehydratase; EC 4.2.1.19 from Candida albicans | 40% id,
78% cov |
H9C4A4: imidazoleglycerol-phosphate dehydratase (EC 4.2.1.19) from Kazachstania humilis | 43% id,
73% cov |
hisB: imidazoleglycerol-phosphate dehydratase; EC 4.2.1.19 from Emericella nidulans | 44% id,
69% cov |
HIS7_SPILD / D2QPE6: Histidine biosynthesis bifunctional protein HisB; EC 3.1.3.15; EC 4.2.1.19 from Spirosoma linguale | 47% id,
51% cov |
HisB / b2022: imidazoleglycerol-phosphate dehydratase / histidinol-phosphatase (EC 4.2.1.19; EC 3.1.3.15) from Escherichia coli
hisB / P06987: imidazoleglycerol-phosphate dehydratase / histidinol-phosphatase (EC 4.2.1.19; EC 3.1.3.15) from Escherichia coli | 44% id,
53% cov |
HIS7_ECO57 / Q9S5G5: Histidine biosynthesis bifunctional protein HisB; EC 3.1.3.15; EC 4.2.1.19 from Escherichia coli | 44% id,
53% cov |
HIS7_BACTN / Q8ABA7: Histidine biosynthesis bifunctional protein HisB; EC 3.1.3.15; EC 4.2.1.19 from Bacteroides thetaiotaomicron | 48% id,
47% cov |
More... |
gmhB B149_RS0114315 WP_018125857.1: D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase
is similar to: | PaperBLAST |
HIS7_BACTN / Q8ABA7: Histidine biosynthesis bifunctional protein HisB; EC 3.1.3.15; EC 4.2.1.19 from Bacteroides thetaiotaomicron | 28% id,
50% cov |
HisB / b2022: imidazoleglycerol-phosphate dehydratase / histidinol-phosphatase (EC 4.2.1.19; EC 3.1.3.15) from Escherichia coli
hisB / P06987: imidazoleglycerol-phosphate dehydratase / histidinol-phosphatase (EC 4.2.1.19; EC 3.1.3.15) from Escherichia coli | 33% id,
40% cov |
HIS7_ECO57 / Q9S5G5: Histidine biosynthesis bifunctional protein HisB; EC 3.1.3.15; EC 4.2.1.19 from Escherichia coli | 33% id,
39% cov |
HIS7_SPILD / D2QPE6: Histidine biosynthesis bifunctional protein HisB; EC 3.1.3.15; EC 4.2.1.19 from Spirosoma linguale | 28% id,
45% cov |
More... |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 2 reading frames. These were all redundant with annotated proteins.
by Morgan Price,
Arkin group
Lawrence Berkeley National Laboratory