Searching in Thioalkalivibrio thiocyanodenitrificans ARhD 1 (GCF_000378965.1)
Found 17 curated entries in PaperBLAST's database that match '1.1.2.3' as complete word(s).
These curated entries have 15 distinct sequences.
Running ublast with E ≤ 0.01
Found 7 relevant proteins in Thioalkalivibrio thiocyanodenitrificans ARhD 1, or try another query
| THITHI_RS0110395 WP_018233030.1: LutB/LldF family L-lactate oxidation iron-sulfur protein is similar to: | PaperBLAST |
lldG / Q8EGS5: L-lactate dehydrogenase iron-sulfur cluster-binding protein LldF (EC 1.1.2.3) from Shewanella oneidensis | 38% id, 97% cov |
DVU_3033 / Q726S3: quinone-dependent L-lactate dehydrogenase large subunit (EC 1.1.2.3) from Desulfovibrio vulgaris | 38% id, 64% cov |
DVU_3032 / Q726S4: quinone-dependent L-lactate dehydrogenase small subunit (EC 1.1.2.3) from Desulfovibrio vulgaris | 31% id, 54% cov |
| THITHI_RS0110390 WP_018233029.1: (Fe-S)-binding protein is similar to: | PaperBLAST |
lldE / Q8EGS4: L-lactate dehydrogenase LldE subunit (EC 1.1.2.3) from Shewanella oneidensis | 34% id, 98% cov |
DVU_3033 / Q726S3: quinone-dependent L-lactate dehydrogenase large subunit (EC 1.1.2.3) from Desulfovibrio vulgaris | 37% id, 33% cov |
| THITHI_RS18870 WP_018233031.1: lactate utilization protein is similar to: | PaperBLAST |
lldF / Q8EGS6: L-lactate dehydrogenase LldF subunit (EC 1.1.2.3) from Shewanella oneidensis | 25% id, 96% cov |
DVU_3032 / Q726S4: quinone-dependent L-lactate dehydrogenase small subunit (EC 1.1.2.3) from Desulfovibrio vulgaris | 35% id, 44% cov |
| THITHI_RS0108565 WP_018232671.1: (Fe-S)-binding protein is similar to: | PaperBLAST |
lldE / Q8EGS4: L-lactate dehydrogenase LldE subunit (EC 1.1.2.3) from Shewanella oneidensis | 23% id, 95% cov |
| THITHI_RS0110200 WP_018232993.1: FMN-binding glutamate synthase family protein is similar to: | PaperBLAST |
Q9HV37: L-lactate dehydrogenase (cytochrome) (EC 1.1.2.3) from Pseudomonas aeruginosa | 28% id, 35% cov |
PS417_19130: L-lactate dehydrogenase (cytochrome) (EC 1.1.2.3) from Pseudomonas simiae | 31% id, 32% cov |
CYB2_TALSN / B8MKR3: L-lactate dehydrogenase (cytochrome); EC 1.1.2.3 from Talaromyces stipitatus | 30% id, 32% cov |
| gltB THITHI_RS0109495 WP_018232855.1: glutamate synthase large subunit is similar to: | PaperBLAST |
Q9HV37: L-lactate dehydrogenase (cytochrome) (EC 1.1.2.3) from Pseudomonas aeruginosa | 25% id, 28% cov |
| THITHI_RS0106620 WP_018232290.1: cytochrome b5-like heme/steroid binding domain-containing protein is similar to: | PaperBLAST |
W1QKE8: L-lactate dehydrogenase (cytochrome) (EC 1.1.2.3) from Ogataea angusta | 35% id, 18% cov |
A0A099P7X2: L-lactate dehydrogenase (cytochrome) (EC 1.1.2.3) from Pichia kudriavzevii | 32% id, 18% cov |
CYB2_YEAST / P00175: L-lactate dehydrogenase (cytochrome); Cytochrome b2; Flavocytochrome b2; FCB2; L-lactate ferricytochrome c oxidoreductase; L-LCR; EC 1.1.2.3 from Saccharomyces cerevisiae | 32% id, 14% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 6 reading frames. Except for 2 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
| 2204228-2205700 (frame +2) on NZ_KB900536.1 Thioalkalivibrio thiocyanodenitrificans ARhD 1 scaffold1, whole genome shotgun sequence is similar to: | PaperBLAST |
lldG / Q8EGS5: L-lactate dehydrogenase iron-sulfur cluster-binding protein LldF (EC 1.1.2.3) from Shewanella oneidensis | 37% id, 99% cov |
| 1409673-1410269 (frame +3) on NZ_KB900536.1 Thioalkalivibrio thiocyanodenitrificans ARhD 1 scaffold1, whole genome shotgun sequence is similar to: | PaperBLAST |
A0A099P7X2: L-lactate dehydrogenase (cytochrome) (EC 1.1.2.3) from Pichia kudriavzevii | 30% id, 25% cov |
Lawrence Berkeley National Laboratory