Curated BLAST for Genomes

 

Curated BLAST

Searching in Thioalkalivibrio thiocyanodenitrificans ARhD 1 (GCF_000378965.1)

Found 32 curated entries in PaperBLAST's database that match '2.6.1.44' as complete word(s).

These curated entries have 23 distinct sequences.

Running ublast with E ≤ 0.01

Found 8 relevant proteins in Thioalkalivibrio thiocyanodenitrificans ARhD 1, or try another query

alaC THITHI_RS0101695 WP_018231338.1: alanine transaminase
is similar to:		 PaperBLAST

D2Z0I0: alanine-glyoxylate transaminase (EC 2.6.1.44) from Hydrogenobacter thermophilus

 60% id,
96% cov

aspC / Q4FNY9: alanine—glyoxylate transaminase (EC 2.6.1.44) from Pelagibacter ubique

 28% id,
96% cov

GGT1_ARATH / Q9LR30: Glutamate--glyoxylate aminotransferase 1; AtGGT2; Alanine aminotransferase GGT1; Alanine--glyoxylate aminotransferase GGT1; Alanine-2-oxoglutarate aminotransferase 1; EC 2.6.1.4; EC 2.6.1.2; EC 2.6.1.44; EC 2.6.1.- from Arabidopsis thaliana
AOAT1 / Q9LR30: alanine transaminase (EC 2.6.1.44; EC 2.6.1.2; EC 2.6.1.4) from Arabidopsis thaliana

 27% id,
42% cov

More...

THITHI_RS0102480 WP_026185995.1: alanine--glyoxylate aminotransferase family protein
is similar to:		 PaperBLAST

AGT1_RABIT / P31030: Alanine--glyoxylate aminotransferase; AGT; Serine--pyruvate aminotransferase; SPT; EC 2.6.1.44; EC 2.6.1.51 from Oryctolagus cuniculus

 42% id,
94% cov

AGT1_HUMAN / P21549: Alanine--glyoxylate aminotransferase; AGT; Serine--pyruvate aminotransferase; SPT; EC 2.6.1.44; EC 2.6.1.51 from Homo sapiens
AGXT1 / P21549: Serine--pyruvate aminotransferase (EC 2.6.1.44; EC 2.6.1.51) from Homo sapiens

 41% id,
94% cov

AGT_AEDAE / Q3LSM4: Alanine--glyoxylate aminotransferase; EC 2.6.1.44 from Aedes aegypti

 40% id,
96% cov

More...

THITHI_RS0103675 WP_018231727.1: pyridoxal phosphate-dependent aminotransferase
is similar to:		 PaperBLAST

aspC / Q4FNY9: alanine—glyoxylate transaminase (EC 2.6.1.44) from Pelagibacter ubique

 35% id,
100% cov

D2Z0I0: alanine-glyoxylate transaminase (EC 2.6.1.44) from Hydrogenobacter thermophilus

 26% id,
96% cov

THITHI_RS0106505 WP_018232267.1: acetylornithine transaminase
is similar to:		 PaperBLAST

AGT22_ARATH / Q94AL9: Alanine--glyoxylate aminotransferase 2 homolog 2, mitochondrial; Beta-alanine-pyruvate aminotransferase 2; EC 2.6.1.44 from Arabidopsis thaliana

 35% id,
82% cov

AGT21_ARATH / Q940M2: Alanine--glyoxylate aminotransferase 2 homolog 1, mitochondrial; Beta-alanine-pyruvate aminotransferase 1; EC 2.6.1.44 from Arabidopsis thaliana

 32% id,
85% cov

Q9SR86: beta-alanine-pyruvate transaminase (EC 2.6.1.18); alanine-glyoxylate transaminase (EC 2.6.1.44) from Arabidopsis thaliana

 32% id,
84% cov

More...

THITHI_RS0102270 WP_026185985.1: pyridoxal phosphate-dependent aminotransferase
is similar to:		 PaperBLAST

D2Z0I0: alanine-glyoxylate transaminase (EC 2.6.1.44) from Hydrogenobacter thermophilus

 29% id,
95% cov

aspC / Q4FNY9: alanine—glyoxylate transaminase (EC 2.6.1.44) from Pelagibacter ubique

 27% id,
100% cov

CRU31975 / Q42685: L-alanine aminotransferase monomer (EC 2.6.1.44; EC 2.6.1.2; EC 2.6.1.4) from Chlamydomonas reinhardtii

 26% id,
70% cov

THITHI_RS0103415 WP_018231675.1: adenosylmethionine--8-amino-7-oxononanoate transaminase
is similar to:		 PaperBLAST

AGT2_MOUSE / Q3UEG6: Alanine--glyoxylate aminotransferase 2, mitochondrial; AGT 2; (R)-3-amino-2-methylpropionate--pyruvate transaminase; Beta-ALAAT II; Beta-alanine-pyruvate aminotransferase; D-3-aminoisobutyrate-pyruvate aminotransferase; D-AIBAT; D-beta-aminoisobutyrate-pyruvate aminotransferase; EC 2.6.1.44; EC 2.6.1.40; EC 2.6.1.18 from Mus musculus
Q3UEG6: alanine-glyoxylate transaminase (EC 2.6.1.44) from Mus musculus

 30% id,
81% cov

hisC THITHI_RS0102420 WP_018231479.1: histidinol-phosphate transaminase
is similar to:		 PaperBLAST

aspC / Q4FNY9: alanine—glyoxylate transaminase (EC 2.6.1.44) from Pelagibacter ubique

 24% id,
94% cov

hemL THITHI_RS0106275 WP_018232220.1: glutamate-1-semialdehyde 2,1-aminomutase
is similar to:		 PaperBLAST

AGT22_ARATH / Q94AL9: Alanine--glyoxylate aminotransferase 2 homolog 2, mitochondrial; Beta-alanine-pyruvate aminotransferase 2; EC 2.6.1.44 from Arabidopsis thaliana

 25% id,
83% cov

AGT21_ARATH / Q940M2: Alanine--glyoxylate aminotransferase 2 homolog 1, mitochondrial; Beta-alanine-pyruvate aminotransferase 1; EC 2.6.1.44 from Arabidopsis thaliana

 29% id,
70% cov

Q9SR86: beta-alanine-pyruvate transaminase (EC 2.6.1.18); alanine-glyoxylate transaminase (EC 2.6.1.44) from Arabidopsis thaliana

 29% id,
60% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 7 reading frames. Except for 2 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

1388324-1389565 (frame +2) on NZ_KB900536.1 Thioalkalivibrio thiocyanodenitrificans ARhD 1 scaffold1, whole genome shotgun sequence
is similar to:		 PaperBLAST

AGT22_ARATH / Q94AL9: Alanine--glyoxylate aminotransferase 2 homolog 2, mitochondrial; Beta-alanine-pyruvate aminotransferase 2; EC 2.6.1.44 from Arabidopsis thaliana
Also see hits to annotated proteins above

 33% id,
89% cov

Q9SR86: beta-alanine-pyruvate transaminase (EC 2.6.1.18); alanine-glyoxylate transaminase (EC 2.6.1.44) from Arabidopsis thaliana
Also see hits to annotated proteins above

 31% id,
87% cov

AGT2_HUMAN / Q9BYV1: Alanine--glyoxylate aminotransferase 2, mitochondrial; AGT 2; (R)-3-amino-2-methylpropionate--pyruvate transaminase; Beta-ALAAT II; Beta-alanine-pyruvate aminotransferase; D-3-aminoisobutyrate-pyruvate aminotransferase; D-AIBAT; D-beta-aminoisobutyrate-pyruvate aminotransferase; EC 2.6.1.44; EC 2.6.1.40; EC 2.6.1.18 from Homo sapiens
AGXT2 / Q9BYV1: alanine--glyoxylate aminotransferase 2, mitochondrial (EC 2.6.1.44) from Homo sapiens
Q9BYV1: alanine-glyoxylate transaminase (EC 2.6.1.44) from Homo sapiens
Also see hits to annotated proteins above

 36% id,
32% cov

More...

737661-739466 (frame +3) on NZ_KB900536.1 Thioalkalivibrio thiocyanodenitrificans ARhD 1 scaffold1, whole genome shotgun sequence
is similar to:		 PaperBLAST

AGT2_RAT / Q64565: Alanine--glyoxylate aminotransferase 2, mitochondrial; AGT 2; (R)-3-amino-2-methylpropionate--pyruvate transaminase; Beta-ALAAT II; Beta-alanine-pyruvate aminotransferase; D-3-aminoisobutyrate-pyruvate aminotransferase; D-AIBAT; D-beta-aminoisobutyrate-pyruvate aminotransferase; EC 2.6.1.44; EC 2.6.1.40; EC 2.6.1.18 from Rattus norvegicus
Q64565: (R)-3-amino-2-methylpropionate-pyruvate transaminase (EC 2.6.1.40); alanine-glyoxylate transaminase (EC 2.6.1.44) from Rattus norvegicus
Also see hits to annotated proteins above

 30% id,
83% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory