Searching in Thioalkalivibrio thiocyanodenitrificans ARhD 1 (GCF_000378965.1)
Found 19 curated entries in PaperBLAST's database that match '2.7.1.39' as complete word(s).
These curated entries have 13 distinct sequences.
Running ublast with E ≤ 0.01
Found 3 relevant proteins in Thioalkalivibrio thiocyanodenitrificans ARhD 1, or try another query
| THITHI_RS0111425 WP_018233228.1: homoserine kinase is similar to: | PaperBLAST |
KHSE_PSEAE / P29364: Homoserine kinase; HK; HSK; EC 2.7.1.39 from Pseudomonas aeruginosa | 34% id, 95% cov |
| aroK THITHI_RS0109475 WP_018232851.1: shikimate kinase AroK is similar to: | PaperBLAST |
thrB / B8DPL9: homoserine kinase (EC 2.7.1.39) from Desulfovibrio vulgaris | 35% id, 78% cov |
| ispE THITHI_RS0108180 WP_018232593.1: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase is similar to: | PaperBLAST |
CA265_RS23470: homoserine kinase (EC 2.7.1.39) from Pedobacter sp. | 27% id, 57% cov |
KHSE_ARATH / Q8L7R2: Homoserine kinase; Protein DOWNY MILDEW RESISTANT 1; EC 2.7.1.39 from Arabidopsis thaliana | 24% id, 64% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 3 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
| 1998012-1998617 (frame +3) on NZ_KB900536.1 Thioalkalivibrio thiocyanodenitrificans ARhD 1 scaffold1, whole genome shotgun sequence is similar to: | PaperBLAST |
thrB / B8DPL9: homoserine kinase (EC 2.7.1.39) from Desulfovibrio vulgaris | 33% id, 88% cov |
Lawrence Berkeley National Laboratory