Curated BLAST for Genomes

 

Curated BLAST

Searching in Thioalkalivibrio thiocyanodenitrificans ARhD 1 (GCF_000378965.1)

Found 31 curated entries in PaperBLAST's database that match '3.1.3.15' as complete word(s).

These curated entries have 24 distinct sequences.

Running ublast with E ≤ 0.01

Found 6 relevant proteins in Thioalkalivibrio thiocyanodenitrificans ARhD 1, or try another query

THITHI_RS0106230 WP_018232211.1: HAD family hydrolase
is similar to:
PaperBLAST

HIS9_PSEAE / Q9I6F6: Histidinol-phosphatase; Hol-Pase; Histidinol-phosphate phosphatase; EC 3.1.3.15 from Pseudomonas aeruginosa

59% id,
100% cov

HP15_461: Histidinol-phosphatase (EC:3.1.3.15) from Marinobacter adhaerens

57% id,
100% cov

Psest_3864: Histidinol-phosphatase (EC:3.1.3.15) from Pseudomonas stutzeri

56% id,
100% cov

More...

THITHI_RS0107660 WP_018232497.1: inositol monophosphatase family protein
is similar to:
PaperBLAST

AZOBR_RS03845: Histidinol-phosphatase [alternative form] (EC 3.1.3.15) from Azospirillum brasilense

41% id,
98% cov

PGA1_c21860: Histidinol-phosphatase [alternative form] (EC 3.1.3.15) from Phaeobacter inhibens

37% id,
97% cov

HISN_MYCTU / P95189: Histidinol-phosphatase; HolPase; Histidinol-phosphate phosphatase; EC 3.1.3.15 from Mycobacterium tuberculosis
P95189: histidinol-phosphatase (EC 3.1.3.15) from Mycobacterium tuberculosis

35% id,
98% cov

More...

THITHI_RS0102170 WP_026185981.1: inositol monophosphatase family protein
is similar to:
PaperBLAST

AZOBR_RS03845: Histidinol-phosphatase [alternative form] (EC 3.1.3.15) from Azospirillum brasilense

35% id,
92% cov

HISN_STRCO / Q9K4B1: Histidinol-phosphatase; HolPase; Histidinol-phosphate phosphatase; EC 3.1.3.15 from Streptomyces coelicolor

32% id,
97% cov

HISN_CORGL / Q8NS80: Histidinol-phosphatase; HolPase; Histidinol-phosphate phosphatase; EC 3.1.3.15 from Corynebacterium glutamicum
hisN / Q8NS80: histidinol-phosphatase (EC 3.1.3.15) from Corynebacterium glutamicum
Q8NS80: histidinol-phosphatase (EC 3.1.3.15) from Corynebacterium glutamicum

31% id,
97% cov

More...

cysQ THITHI_RS0108885 WP_018232735.1: 3'(2'),5'-bisphosphate nucleotidase CysQ
is similar to:
PaperBLAST

HISN_MYCTU / P95189: Histidinol-phosphatase; HolPase; Histidinol-phosphate phosphatase; EC 3.1.3.15 from Mycobacterium tuberculosis
P95189: histidinol-phosphatase (EC 3.1.3.15) from Mycobacterium tuberculosis

36% id,
79% cov

Ga0059261_2035: Histidinol-phosphatase [alternative form] (EC 3.1.3.15) from Sphingomonas koreensis

29% id,
95% cov

PGA1_c21860: Histidinol-phosphatase [alternative form] (EC 3.1.3.15) from Phaeobacter inhibens

31% id,
88% cov

More...

THITHI_RS0107555 WP_018232476.1: inositol monophosphatase family protein
is similar to:
PaperBLAST

AZOBR_RS03845: Histidinol-phosphatase [alternative form] (EC 3.1.3.15) from Azospirillum brasilense

28% id,
97% cov

HISN_STRCO / Q9K4B1: Histidinol-phosphatase; HolPase; Histidinol-phosphate phosphatase; EC 3.1.3.15 from Streptomyces coelicolor

29% id,
92% cov

Ga0059261_2035: Histidinol-phosphatase [alternative form] (EC 3.1.3.15) from Sphingomonas koreensis

29% id,
92% cov

More...

hisB THITHI_RS0112110 WP_018233366.1: imidazoleglycerol-phosphate dehydratase HisB
is similar to:
PaperBLAST

HisB / b2022: imidazoleglycerol-phosphate dehydratase / histidinol-phosphatase (EC 4.2.1.19; EC 3.1.3.15) from Escherichia coli
hisB / P06987: imidazoleglycerol-phosphate dehydratase / histidinol-phosphatase (EC 4.2.1.19; EC 3.1.3.15) from Escherichia coli

47% id,
53% cov

HIS7_ECO57 / Q9S5G5: Histidine biosynthesis bifunctional protein HisB; EC 3.1.3.15; EC 4.2.1.19 from Escherichia coli

47% id,
53% cov

HIS7_SPILD / D2QPE6: Histidine biosynthesis bifunctional protein HisB; EC 3.1.3.15; EC 4.2.1.19 from Spirosoma linguale

48% id,
51% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 6 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

2544319-2544945 (frame +1) on NZ_KB900536.1 Thioalkalivibrio thiocyanodenitrificans ARhD 1 scaffold1, whole genome shotgun sequence
is similar to:
PaperBLAST

HisB / b2022: imidazoleglycerol-phosphate dehydratase / histidinol-phosphatase (EC 4.2.1.19; EC 3.1.3.15) from Escherichia coli
hisB / P06987: imidazoleglycerol-phosphate dehydratase / histidinol-phosphatase (EC 4.2.1.19; EC 3.1.3.15) from Escherichia coli
Also see hits to annotated proteins above

47% id,
55% cov

HIS7_ECO57 / Q9S5G5: Histidine biosynthesis bifunctional protein HisB; EC 3.1.3.15; EC 4.2.1.19 from Escherichia coli
Also see hits to annotated proteins above

47% id,
55% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory