Searching in Thiomicrorhabdus arctica DSM 13458 (GCF_000381085.1)
Found 58 curated entries in PaperBLAST's database that match '1.1.1.25' as complete word(s).
These curated entries have 42 distinct sequences.
Running ublast with E ≤ 0.01
Found 6 relevant proteins in Thiomicrorhabdus arctica DSM 13458, or try another query
| aroE F612_RS0108340 WP_019557312.1: shikimate dehydrogenase is similar to: | PaperBLAST |
Q88RQ5: shikimate dehydrogenase (NADP+) (EC 1.1.1.25) from Pseudomonas putida | 50% id, 97% cov |
AROE_HAEIN / P43876: Shikimate dehydrogenase (NADP(+)); SDH; EC 1.1.1.25 from Haemophilus influenzae | 47% id, 99% cov |
AROE_VIBCH / Q9KVT3: Shikimate dehydrogenase (NADP(+)); SDH; EC 1.1.1.25 from Vibrio cholerae | 47% id, 96% cov |
| hemA F612_RS0106750 WP_019556999.1: glutamyl-tRNA reductase is similar to: | PaperBLAST |
AROE_VIBCH / Q9KVT3: Shikimate dehydrogenase (NADP(+)); SDH; EC 1.1.1.25 from Vibrio cholerae | 27% id, 38% cov |
Q88RQ5: shikimate dehydrogenase (NADP+) (EC 1.1.1.25) from Pseudomonas putida | 33% id, 28% cov |
A0A6P8EJ47: shikimate dehydrogenase (NADP+) (EC 1.1.1.25) from Punica granatum | 28% id, 19% cov |
| mnmC F612_RS0108405 WP_019557325.1: bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC is similar to: | PaperBLAST |
AROE_THET8 / Q5SJF8: Shikimate dehydrogenase (NADP(+)); SDH; EC 1.1.1.25 from Thermus thermophilus | 40% id, 21% cov |
| aroB F612_RS13355 WP_019557501.1: 3-dehydroquinate synthase is similar to: | PaperBLAST |
ARO1_EMENI / P07547: Pentafunctional AROM polypeptide; EC 4.2.3.4; EC 2.5.1.19; EC 2.7.1.71; EC 4.2.1.10; EC 1.1.1.25 from Emericella nidulans | 38% id, 21% cov |
ARO1_YEAST / P08566: Pentafunctional AROM polypeptide; EC 4.2.3.4; EC 2.5.1.19; EC 2.7.1.71; EC 4.2.1.10; EC 1.1.1.25 from Saccharomyces cerevisiae | 44% id, 10% cov |
ARO1_YEAST / P08566: Pentafunctional AROM polypeptide; EC 4.2.3.4; EC 2.5.1.19; EC 2.7.1.71; EC 4.2.1.10; EC 1.1.1.25 from Saccharomyces cerevisiae | 36% id, 9% cov |
| F612_RS0107155 WP_019557080.1: tRNA threonylcarbamoyladenosine dehydratase is similar to: | PaperBLAST |
Q88JP1: shikimate dehydrogenase (NADP+) (EC 1.1.1.25); quinate/shikimate dehydrogenase [NAD(P)+] (EC 1.1.1.282) from Pseudomonas putida | 46% id, 14% cov |
| sdhA F612_RS0104725 WP_019556604.1: succinate dehydrogenase flavoprotein subunit is similar to: | PaperBLAST |
DHQSD_ARATH / Q9SQT8: Bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase, chloroplastic; DHQ-SDH protein; DHQase-SORase; Protein EMBRYO DEFECTIVE 3004; EC 4.2.1.10; EC 1.1.1.25 from Arabidopsis thaliana | 26% id, 18% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 3 reading frames. These were all redundant with annotated proteins.
Lawrence Berkeley National Laboratory