Searching in Thiomicrorhabdus arctica DSM 13458 (GCF_000381085.1)
Found 13 curated entries in PaperBLAST's database that match '1.3.1.12' as complete word(s).
These curated entries have 12 distinct sequences.
Running ublast with E ≤ 0.01
Found 5 relevant proteins in Thiomicrorhabdus arctica DSM 13458, or try another query
| F612_RS0103085 WP_019556284.1: prephenate dehydrogenase/arogenate dehydrogenase family protein is similar to: | PaperBLAST |
TYRC_ZYMMO / Q04983: Cyclohexadienyl dehydrogenase; Arogenate dehydrogenase; ADH; Prephenate dehydrogenase; PDH; EC 1.3.1.43; EC 1.3.1.12 from Zymomonas mobilis | 37% id, 96% cov |
O67636: prephenate dehydrogenase (EC 1.3.1.12) from Aquifex aeolicus | 39% id, 90% cov |
J9XQS6: prephenate dehydrogenase (EC 1.3.1.12) from uncultured bacterium | 34% id, 92% cov |
| pheA F612_RS0103095 WP_019556286.1: prephenate dehydratase is similar to: | PaperBLAST |
O30012: prephenate dehydrogenase (EC 1.3.1.12); prephenate dehydratase (EC 4.2.1.51); chorismate mutase (EC 5.4.99.5) from Archaeoglobus fulgidus | 34% id, 57% cov |
| aceF F612_RS0104270 WP_019556516.1: dihydrolipoyllysine-residue acetyltransferase is similar to: | PaperBLAST |
P06959: pyruvate dehydrogenase system (EC 1.2.1.104); prephenate dehydrogenase (EC 1.3.1.12); dihydrolipoyllysine-residue acetyltransferase (EC 2.3.1.12) from Escherichia coli | 34% id, 36% cov |
| lpdA F612_RS0104265 WP_019556515.1: dihydrolipoyl dehydrogenase is similar to: | PaperBLAST |
P06959: pyruvate dehydrogenase system (EC 1.2.1.104); prephenate dehydrogenase (EC 1.3.1.12); dihydrolipoyllysine-residue acetyltransferase (EC 2.3.1.12) from Escherichia coli | 45% id, 19% cov |
| uca F612_RS0104895 WP_019556638.1: urea carboxylase is similar to: | PaperBLAST |
P06959: pyruvate dehydrogenase system (EC 1.2.1.104); prephenate dehydrogenase (EC 1.3.1.12); dihydrolipoyllysine-residue acetyltransferase (EC 2.3.1.12) from Escherichia coli | 26% id, 17% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 5 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
| 661146-662123 (frame -1) on NZ_KB905899.1 Thiomicrorhabdus arctica DSM 13458 F612DRAFT_scaffold00001.1, whole genome shotgun sequence is similar to: | PaperBLAST |
O67636: prephenate dehydrogenase (EC 1.3.1.12) from Aquifex aeolicus | 38% id, 92% cov |
Lawrence Berkeley National Laboratory