Curated BLAST for Genomes

 

Curated BLAST

Searching in Thiomicrorhabdus arctica DSM 13458 (GCF_000381085.1)

Found 44 curated entries in PaperBLAST's database that match '1.4.3.21' as complete word(s).

These curated entries have 31 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Thiomicrorhabdus arctica DSM 13458, or try another query

F612_RS0111645 WP_026329763.1: FAD-dependent oxidoreductase
is similar to:
PaperBLAST

AOFA_MOUSE / Q64133: Amine oxidase [flavin-containing] A; Monoamine oxidase type A; MAO-A; EC 1.4.3.21; EC 1.4.3.4 from Mus musculus

51% id,
7% cov

AOFA_HUMAN / P21397: Amine oxidase [flavin-containing] A; Monoamine oxidase type A; MAO-A; EC 1.4.3.21; EC 1.4.3.4 from Homo sapiens

49% id,
7% cov

nirB F612_RS0108940 WP_019557427.1: nitrite reductase large subunit NirB
is similar to:
PaperBLAST

AOF_DANRE / Q6NSN2: Amine oxidase [flavin-containing]; Monoamine oxidase; MAO; Z-MAO; EC 1.4.3.21; EC 1.4.3.4 from Danio rerio

53% id,
6% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory