Curated BLAST
Searching in Thiomicrorhabdus arctica DSM 13458 (GCF_000381085.1)
Found 22 curated entries in PaperBLAST's database that match '2.3.3.14' as complete word(s).
These curated entries have 14 distinct sequences.
Running ublast with E ≤ 0.01
Found 3 relevant proteins in Thiomicrorhabdus arctica DSM 13458, or try another query
F612_RS0100685 WP_019555815.1: 2-isopropylmalate synthase
is similar to: | PaperBLAST |
D0VY45: homocitrate synthase (EC 2.3.3.14) from Lotus japonicus | 46% id,
95% cov |
AKSA_METJA / Q57926: Homocitrate synthase AksA; (R)-homo(2)citrate synthase; (R)-homo(3)citrate synthase; EC 2.3.3.14; EC 2.3.3.- from Methanocaldococcus jannaschii | 40% id,
93% cov |
P58637: homocitrate synthase (EC 2.3.3.14) from Nostoc sp. | 36% id,
99% cov |
A0A0S6UXF5: homocitrate synthase (EC 2.3.3.14) from Bradyrhizobium sp. | 36% id,
91% cov |
NIFV_AZOVI / P05342: Homocitrate synthase; EC 2.3.3.14 from Azotobacter vinelandii
nifV / P05342: homocitrate synthase monomer (EC 2.3.3.14) from Azotobacter vinelandii | 38% id,
86% cov |
HOSA_SULAC / Q4J989: Homocitrate synthase; HCS; EC 2.3.3.14 from Sulfolobus acidocaldarius
Q4J989: homocitrate synthase (EC 2.3.3.14) from Sulfolobus acidocaldarius | 33% id,
97% cov |
HOSA_THET2 / O87198: Homocitrate synthase; HCS; EC 2.3.3.14 from Thermus thermophilus
hcs / O87198: homocitrate synthase (EC 2.3.3.14) from Thermus thermophilus | 32% id,
98% cov |
A0A1Y6KBA1: homocitrate synthase (EC 2.3.3.14) from Bradyrhizobium sp. | 36% id,
84% cov |
HOSA_SULTO / Q971S5: Homocitrate synthase; HCS; EC 2.3.3.14 from Sulfurisphaera tokodaii | 37% id,
76% cov |
HOSM_SCHPO / Q9Y823: Homocitrate synthase, mitochondrial; HCS; EC 2.3.3.14 from Schizosaccharomyces pombe
lys4 / RF|NP_596458.1: homocitrate synthase (predicted); EC 2.3.3.14 from Schizosaccharomyces pombe | 29% id,
87% cov |
HOSC_YEAST / P48570: Homocitrate synthase, cytosolic isozyme; HCS; EC 2.3.3.14 from Saccharomyces cerevisiae
LYS20 / P48570: homocitrate synthase (EC 2.3.3.14) from Saccharomyces cerevisiae
P48570: homocitrate synthase (EC 2.3.3.14) from Saccharomyces cerevisiae | 28% id,
85% cov |
HOSM_YEAST / Q12122: Homocitrate synthase, mitochondrial; HCS; EC 2.3.3.14 from Saccharomyces cerevisiae
LYS21 / Q12122: homocitrate synthase (EC 2.3.3.14) from Saccharomyces cerevisiae
Q12122: homocitrate synthase (EC 2.3.3.14) from Saccharomyces cerevisiae | 28% id,
83% cov |
C7C437: homocitrate synthase (EC 2.3.3.14) from Aspergillus fumigatus | 27% id,
87% cov |
M1U949: homocitrate synthase (EC 2.3.3.14) from Flammulina velutipes | 29% id,
78% cov |
More... |
F612_RS0110870 WP_019557799.1: 2-isopropylmalate synthase
is similar to: | PaperBLAST |
AKSA_METJA / Q57926: Homocitrate synthase AksA; (R)-homo(2)citrate synthase; (R)-homo(3)citrate synthase; EC 2.3.3.14; EC 2.3.3.- from Methanocaldococcus jannaschii | 26% id,
85% cov |
HOSA_THET2 / O87198: Homocitrate synthase; HCS; EC 2.3.3.14 from Thermus thermophilus
hcs / O87198: homocitrate synthase (EC 2.3.3.14) from Thermus thermophilus | 24% id,
90% cov |
D0VY45: homocitrate synthase (EC 2.3.3.14) from Lotus japonicus | 26% id,
65% cov |
C7C437: homocitrate synthase (EC 2.3.3.14) from Aspergillus fumigatus | 25% id,
65% cov |
P58637: homocitrate synthase (EC 2.3.3.14) from Nostoc sp. | 28% id,
59% cov |
A0A0S6UXF5: homocitrate synthase (EC 2.3.3.14) from Bradyrhizobium sp. | 27% id,
53% cov |
NIFV_AZOVI / P05342: Homocitrate synthase; EC 2.3.3.14 from Azotobacter vinelandii
nifV / P05342: homocitrate synthase monomer (EC 2.3.3.14) from Azotobacter vinelandii | 29% id,
46% cov |
A0A1Y6KBA1: homocitrate synthase (EC 2.3.3.14) from Bradyrhizobium sp. | 28% id,
48% cov |
HOSC_YEAST / P48570: Homocitrate synthase, cytosolic isozyme; HCS; EC 2.3.3.14 from Saccharomyces cerevisiae
LYS20 / P48570: homocitrate synthase (EC 2.3.3.14) from Saccharomyces cerevisiae
P48570: homocitrate synthase (EC 2.3.3.14) from Saccharomyces cerevisiae | 29% id,
39% cov |
HOSM_YEAST / Q12122: Homocitrate synthase, mitochondrial; HCS; EC 2.3.3.14 from Saccharomyces cerevisiae
LYS21 / Q12122: homocitrate synthase (EC 2.3.3.14) from Saccharomyces cerevisiae
Q12122: homocitrate synthase (EC 2.3.3.14) from Saccharomyces cerevisiae | 29% id,
38% cov |
More... |
dmpG F612_RS0106545 WP_019556960.1: 4-hydroxy-2-oxovalerate aldolase
is similar to: | PaperBLAST |
P58637: homocitrate synthase (EC 2.3.3.14) from Nostoc sp. | 27% id,
69% cov |
HOSM_SCHPO / Q9Y823: Homocitrate synthase, mitochondrial; HCS; EC 2.3.3.14 from Schizosaccharomyces pombe
lys4 / RF|NP_596458.1: homocitrate synthase (predicted); EC 2.3.3.14 from Schizosaccharomyces pombe | 25% id,
75% cov |
A0A0S6UXF5: homocitrate synthase (EC 2.3.3.14) from Bradyrhizobium sp. | 25% id,
71% cov |
HOSA_SULTO / Q971S5: Homocitrate synthase; HCS; EC 2.3.3.14 from Sulfurisphaera tokodaii | 26% id,
66% cov |
NIFV_AZOVI / P05342: Homocitrate synthase; EC 2.3.3.14 from Azotobacter vinelandii
nifV / P05342: homocitrate synthase monomer (EC 2.3.3.14) from Azotobacter vinelandii | 27% id,
64% cov |
A0A1Y6KBA1: homocitrate synthase (EC 2.3.3.14) from Bradyrhizobium sp. | 24% id,
69% cov |
HOSA_SULAC / Q4J989: Homocitrate synthase; HCS; EC 2.3.3.14 from Sulfolobus acidocaldarius
Q4J989: homocitrate synthase (EC 2.3.3.14) from Sulfolobus acidocaldarius | 25% id,
65% cov |
HOSC_YEAST / P48570: Homocitrate synthase, cytosolic isozyme; HCS; EC 2.3.3.14 from Saccharomyces cerevisiae
LYS20 / P48570: homocitrate synthase (EC 2.3.3.14) from Saccharomyces cerevisiae
P48570: homocitrate synthase (EC 2.3.3.14) from Saccharomyces cerevisiae | 23% id,
71% cov |
HOSA_THET2 / O87198: Homocitrate synthase; HCS; EC 2.3.3.14 from Thermus thermophilus
hcs / O87198: homocitrate synthase (EC 2.3.3.14) from Thermus thermophilus | 25% id,
65% cov |
HOSM_YEAST / Q12122: Homocitrate synthase, mitochondrial; HCS; EC 2.3.3.14 from Saccharomyces cerevisiae
LYS21 / Q12122: homocitrate synthase (EC 2.3.3.14) from Saccharomyces cerevisiae
Q12122: homocitrate synthase (EC 2.3.3.14) from Saccharomyces cerevisiae | 23% id,
69% cov |
M1U949: homocitrate synthase (EC 2.3.3.14) from Flammulina velutipes | 23% id,
68% cov |
D0VY45: homocitrate synthase (EC 2.3.3.14) from Lotus japonicus | 24% id,
52% cov |
More... |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 3 reading frames. These were all redundant with annotated proteins.
by Morgan Price,
Arkin group
Lawrence Berkeley National Laboratory