Curated BLAST for Genomes

 

Curated BLAST

Searching in Thiomicrorhabdus arctica DSM 13458 (GCF_000381085.1)

Found 32 curated entries in PaperBLAST's database that match '2.6.1.44' as complete word(s).

These curated entries have 23 distinct sequences.

Running ublast with E ≤ 0.01

Found 11 relevant proteins in Thiomicrorhabdus arctica DSM 13458, or try another query

alaC F612_RS0102765 WP_026329593.1: alanine transaminase
is similar to:
PaperBLAST

D2Z0I0: alanine-glyoxylate transaminase (EC 2.6.1.44) from Hydrogenobacter thermophilus

56% id,
99% cov

aspC / Q4FNY9: alanine—glyoxylate transaminase (EC 2.6.1.44) from Pelagibacter ubique

28% id,
99% cov

F612_RS0110750 WP_019557775.1: alanine--glyoxylate aminotransferase family protein
is similar to:
PaperBLAST

AGT_DROME / Q9W3Z3: Alanine--glyoxylate aminotransferase; AGT; EC 2.6.1.44 from Drosophila melanogaster

42% id,
93% cov

HKT_ANOGA / Q7PRG3: 3-hydroxykynurenine transaminase; AgHKT; Alanine--glyoxylate aminotransferase; EC 2.6.1.63; EC 2.6.1.44 from Anopheles gambiae

40% id,
93% cov

AGT1_RABIT / P31030: Alanine--glyoxylate aminotransferase; AGT; Serine--pyruvate aminotransferase; SPT; EC 2.6.1.44; EC 2.6.1.51 from Oryctolagus cuniculus

40% id,
93% cov

More...

F612_RS0106445 WP_026329666.1: pyridoxal phosphate-dependent aminotransferase
is similar to:
PaperBLAST

aspC / Q4FNY9: alanine—glyoxylate transaminase (EC 2.6.1.44) from Pelagibacter ubique

33% id,
99% cov

D2Z0I0: alanine-glyoxylate transaminase (EC 2.6.1.44) from Hydrogenobacter thermophilus

25% id,
98% cov

F612_RS0110440 WP_019557719.1: aspartate aminotransferase family protein
is similar to:
PaperBLAST

AGT21_ARATH / Q940M2: Alanine--glyoxylate aminotransferase 2 homolog 1, mitochondrial; Beta-alanine-pyruvate aminotransferase 1; EC 2.6.1.44 from Arabidopsis thaliana

31% id,
84% cov

AGT22_ARATH / Q94AL9: Alanine--glyoxylate aminotransferase 2 homolog 2, mitochondrial; Beta-alanine-pyruvate aminotransferase 2; EC 2.6.1.44 from Arabidopsis thaliana

31% id,
83% cov

Q9SR86: beta-alanine-pyruvate transaminase (EC 2.6.1.18); alanine-glyoxylate transaminase (EC 2.6.1.44) from Arabidopsis thaliana

31% id,
82% cov

More...

F612_RS0111525 WP_019557925.1: aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme
is similar to:
PaperBLAST

aspC / Q4FNY9: alanine—glyoxylate transaminase (EC 2.6.1.44) from Pelagibacter ubique

24% id,
99% cov

D2Z0I0: alanine-glyoxylate transaminase (EC 2.6.1.44) from Hydrogenobacter thermophilus

25% id,
96% cov

F612_RS0104085 WP_019556479.1: aspartate aminotransferase family protein
is similar to:
PaperBLAST

AGT21_ARATH / Q940M2: Alanine--glyoxylate aminotransferase 2 homolog 1, mitochondrial; Beta-alanine-pyruvate aminotransferase 1; EC 2.6.1.44 from Arabidopsis thaliana

27% id,
84% cov

AGT22_ARATH / Q94AL9: Alanine--glyoxylate aminotransferase 2 homolog 2, mitochondrial; Beta-alanine-pyruvate aminotransferase 2; EC 2.6.1.44 from Arabidopsis thaliana

27% id,
82% cov

Q9SR86: beta-alanine-pyruvate transaminase (EC 2.6.1.18); alanine-glyoxylate transaminase (EC 2.6.1.44) from Arabidopsis thaliana

28% id,
78% cov

ectB F612_RS0100950 WP_019555867.1: diaminobutyrate--2-oxoglutarate transaminase
is similar to:
PaperBLAST

AGT22_ARATH / Q94AL9: Alanine--glyoxylate aminotransferase 2 homolog 2, mitochondrial; Beta-alanine-pyruvate aminotransferase 2; EC 2.6.1.44 from Arabidopsis thaliana

28% id,
80% cov

AGT21_ARATH / Q940M2: Alanine--glyoxylate aminotransferase 2 homolog 1, mitochondrial; Beta-alanine-pyruvate aminotransferase 1; EC 2.6.1.44 from Arabidopsis thaliana

26% id,
84% cov

AGT2_RAT / Q64565: Alanine--glyoxylate aminotransferase 2, mitochondrial; AGT 2; (R)-3-amino-2-methylpropionate--pyruvate transaminase; Beta-ALAAT II; Beta-alanine-pyruvate aminotransferase; D-3-aminoisobutyrate-pyruvate aminotransferase; D-AIBAT; D-beta-aminoisobutyrate-pyruvate aminotransferase; EC 2.6.1.44; EC 2.6.1.40; EC 2.6.1.18 from Rattus norvegicus
Q64565: (R)-3-amino-2-methylpropionate-pyruvate transaminase (EC 2.6.1.40); alanine-glyoxylate transaminase (EC 2.6.1.44) from Rattus norvegicus

25% id,
47% cov

More...

serC F612_RS0103100 WP_019556287.1: 3-phosphoserine/phosphohydroxythreonine transaminase
is similar to:
PaperBLAST

HKT_AEDAE / Q0IG34: 3-hydroxykynurenine transaminase; 3-hydroxykynurenine transaminase and alanine--glyoxylate aminotransferase; Ae-HKT/AGT; Alanine--glyoxylate aminotransferase; EC 2.6.1.63; EC 2.6.1.44 from Aedes aegypti

22% id,
93% cov

hisC F612_RS0103090 WP_019556285.1: histidinol-phosphate transaminase
is similar to:
PaperBLAST

aspC / Q4FNY9: alanine—glyoxylate transaminase (EC 2.6.1.44) from Pelagibacter ubique

27% id,
78% cov

hemL F612_RS0102235 WP_019556118.1: glutamate-1-semialdehyde 2,1-aminomutase
is similar to:
PaperBLAST

AGT21_ARATH / Q940M2: Alanine--glyoxylate aminotransferase 2 homolog 1, mitochondrial; Beta-alanine-pyruvate aminotransferase 1; EC 2.6.1.44 from Arabidopsis thaliana

28% id,
70% cov

Q9SR86: beta-alanine-pyruvate transaminase (EC 2.6.1.18); alanine-glyoxylate transaminase (EC 2.6.1.44) from Arabidopsis thaliana

28% id,
71% cov

AGT22_ARATH / Q94AL9: Alanine--glyoxylate aminotransferase 2 homolog 2, mitochondrial; Beta-alanine-pyruvate aminotransferase 2; EC 2.6.1.44 from Arabidopsis thaliana

28% id,
68% cov

More...

F612_RS0107385 WP_019557121.1: adenosylmethionine--8-amino-7-oxononanoate transaminase
is similar to:
PaperBLAST

AGT21_ARATH / Q940M2: Alanine--glyoxylate aminotransferase 2 homolog 1, mitochondrial; Beta-alanine-pyruvate aminotransferase 1; EC 2.6.1.44 from Arabidopsis thaliana

27% id,
74% cov

AGT22_ARATH / Q94AL9: Alanine--glyoxylate aminotransferase 2 homolog 2, mitochondrial; Beta-alanine-pyruvate aminotransferase 2; EC 2.6.1.44 from Arabidopsis thaliana

28% id,
64% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 11 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory