Curated BLAST for Genomes

 

Curated BLAST

Searching in Thiomicrorhabdus arctica DSM 13458 (GCF_000381085.1)

Found 32 curated entries in PaperBLAST's database that match '3.1.2.6' as complete word(s).

These curated entries have 20 distinct sequences.

Running ublast with E ≤ 0.01

Found 4 relevant proteins in Thiomicrorhabdus arctica DSM 13458, or try another query

fghA F612_RS0111085 WP_019557842.1: S-formylglutathione hydrolase
is similar to:
PaperBLAST

YeiG / b2154: S-formylglutathione hydrolase / S-lactoylglutathione hydrolase (EC 3.1.2.12; EC 3.1.2.6) from Escherichia coli
yeiG / P33018: S-formylglutathione hydrolase / S-lactoylglutathione hydrolase (EC 3.1.2.12; EC 3.1.2.6) from Escherichia coli

53% id,
99% cov

gloB F612_RS0103390 WP_019556343.1: hydroxyacylglutathione hydrolase
is similar to:
PaperBLAST

Q8YZ99: hydroxyacylglutathione hydrolase (EC 3.1.2.6) from Nostoc sp.

40% id,
100% cov

GLO2C_ARATH / O24496: Hydroxyacylglutathione hydrolase cytoplasmic; Glyoxalase II; Glx II; EC 3.1.2.6 from Arabidopsis thaliana

37% id,
99% cov

GLO2_ECOLI / P0AC84: Hydroxyacylglutathione hydrolase GloB; Glyoxalase II; Glx II; EC 3.1.2.6 from Escherichia coli
YafR / b0212: hydroxyacylglutathione hydrolase GloB (EC 3.1.2.6) from Escherichia coli
gloB / MB|P0AC84: hydroxyacylglutathione hydrolase; EC 3.1.2.6 from Escherichia coli
gloB / P0AC84: hydroxyacylglutathione hydrolase GloB (EC 3.1.2.6) from Escherichia coli

37% id,
100% cov

More...

F612_RS0103370 WP_019556339.1: MBL fold metallo-hydrolase
is similar to:
PaperBLAST

GLO22_ECOLI / P75849: Hydroxyacylglutathione hydrolase GloC; Accessory type II glyoxalase; Glyoxalase II 2; GlxII-2; EC 3.1.2.6 from Escherichia coli
GloC / b0927: hydroxyacylglutathione hydrolase GloC (EC 3.1.2.6) from Escherichia coli
gloC / P75849: hydroxyacylglutathione hydrolase GloC (EC 3.1.2.6) from Escherichia coli

29% id,
88% cov

GLO2M_ARATH / O24495: Hydroxyacylglutathione hydrolase 1, mitochondrial; Glyoxalase II; Glx II; EC 3.1.2.6 from Arabidopsis thaliana

27% id,
65% cov

A0A0D1GCF8: hydroxyacylglutathione hydrolase (EC 3.1.2.6) from Staphylococcus aureus

38% id,
43% cov

F612_RS0107070 WP_019557063.1: MBL fold metallo-hydrolase
is similar to:
PaperBLAST

GLO2N_ARATH / Q9SID3: Hydroxyacylglutathione hydrolase 2, mitochondrial; Glyoxalase II; Glx II; EC 3.1.2.6 from Arabidopsis thaliana

28% id,
66% cov

Q940L0: hydroxyacylglutathione hydrolase (EC 3.1.2.6) from Oryza sativa

27% id,
57% cov

GLO2M_ARATH / O24495: Hydroxyacylglutathione hydrolase 1, mitochondrial; Glyoxalase II; Glx II; EC 3.1.2.6 from Arabidopsis thaliana

27% id,
55% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 4 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory