Searching in Amphritea japonica ATCC BAA-1530 JAMM 1866 (GCF_000381785.1)
Found 7 curated entries in PaperBLAST's database that match '1.5.3.7' as complete word(s).
These curated entries have 6 distinct sequences.
Running ublast with E ≤ 0.01
Found 2 relevant proteins in Amphritea japonica ATCC BAA-1530 JAMM 1866, or try another query
| thiO G329_RS0115320 WP_019622878.1: glycine oxidase ThiO is similar to: | PaperBLAST |
SOX_HUMAN / Q9P0Z9: Peroxisomal sarcosine oxidase; PSO; L-pipecolate oxidase; L-pipecolic acid oxidase; EC 1.5.3.1; EC 1.5.3.7 from Homo sapiens | 21% id, 38% cov |
| mnmC G329_RS0115595 WP_019622933.1: bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC is similar to: | PaperBLAST |
SOX_HUMAN / Q9P0Z9: Peroxisomal sarcosine oxidase; PSO; L-pipecolate oxidase; L-pipecolic acid oxidase; EC 1.5.3.1; EC 1.5.3.7 from Homo sapiens | 26% id, 24% cov |
PIPOX / Q8N6Z6: L-pipecolate oxidase (EC 1.5.3.7) from Homo sapiens | 26% id, 24% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 3 reading frames. Except for 2 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
| 455136-456287 (frame +3) on NZ_KB907099.1 Amphritea japonica ATCC BAA-1530 strain JAMM 1866 G329DRAFT_scaffold00001.1, whole genome shotgun sequence is similar to: | PaperBLAST |
amaA / Q88CC4: pipecolate oxidase (EC 1.5.3.7) from Pseudomonas putida | 25% id, 84% cov |
| 348105-349310 (frame +3) on NZ_KB907100.1 Amphritea japonica ATCC BAA-1530 strain JAMM 1866 G329DRAFT_scaffold00002.2, whole genome shotgun sequence is similar to: | PaperBLAST |
amaA / Q88CC4: pipecolate oxidase (EC 1.5.3.7) from Pseudomonas putida | 28% id, 32% cov |
Lawrence Berkeley National Laboratory