Curated BLAST for Genomes

 

Curated BLAST

Searching in Streptococcus oralis subsp. dentisani 7747 CECT 7747 (GCF_000382825.1)

Found 76 curated entries in PaperBLAST's database that match '1.1.1.27' as complete word(s).

These curated entries have 63 distinct sequences.

Running ublast with E ≤ 0.01

Found 4 relevant proteins in Streptococcus oralis subsp. dentisani 7747 CECT 7747, or try another query

HK29_RS04125 WP_038806036.1: L-lactate dehydrogenase
is similar to:
PaperBLAST

LDH_STRP2 / Q04K99: L-lactate dehydrogenase; L-LDH; EC 1.1.1.27 from Streptococcus pneumoniae
LDH_STRPN / P0A3M9: L-lactate dehydrogenase; L-LDH; EC 1.1.1.27 from Streptococcus pneumoniae

99% id,
100% cov

ldh / P26283: L-lactate dehydrogenase subunit (EC 1.1.1.27) from Streptococcus mutans
P26283: L-lactate dehydrogenase (EC 1.1.1.27) from Streptococcus mutans

88% id,
100% cov

ldhA: L-lactate dehydrogenase 1; EC 1.1.1.27 from Lactococcus lactis

76% id,
100% cov

More...

adhE HK29_RS00450 WP_038805738.1: bifunctional acetaldehyde-CoA/alcohol dehydrogenase
is similar to:
PaperBLAST

I3VSF1: alcohol dehydrogenase (EC 1.1.1.1); L-lactate dehydrogenase (EC 1.1.1.27); acetaldehyde dehydrogenase (acetylating) (EC 1.2.1.10) from Thermoanaerobacterium saccharolyticum

55% id,
100% cov

lctO HK29_RS00240 WP_038805711.1: L-lactate oxidase
is similar to:
PaperBLAST

Q44467: L-lactate dehydrogenase (EC 1.1.1.27); L-lactate oxidase (EC 1.1.3.2) from Aerococcus viridans

52% id,
98% cov

HK29_RS01820 WP_038805855.1: iron-containing alcohol dehydrogenase
is similar to:
PaperBLAST

I3VSF1: alcohol dehydrogenase (EC 1.1.1.1); L-lactate dehydrogenase (EC 1.1.1.27); acetaldehyde dehydrogenase (acetylating) (EC 1.2.1.10) from Thermoanaerobacterium saccharolyticum

38% id,
45% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 4 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory