Curated BLAST for Genomes

 

Curated BLAST

Searching in Streptococcus oralis subsp. dentisani 7747 CECT 7747 (GCF_000382825.1)

Found 6 curated entries in PaperBLAST's database that match '1.1.1.60' as complete word(s).

These curated entries have 4 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Streptococcus oralis subsp. dentisani 7747 CECT 7747, or try another query

gndA HK29_RS08000 WP_000158790.1: NADP-dependent phosphogluconate dehydrogenase
is similar to:
PaperBLAST

Q8ZLV8: 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60) from Salmonella enterica

25% id,
63% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

1080673-1082289 (frame -3) on NZ_CAUK01000004.1 Streptococcus oralis subsp. dentisani 7747 strain CECT 7747, whole genome shotgun sequence
is similar to:
PaperBLAST

GARR_ECOLI / P0ABQ2: 2-hydroxy-3-oxopropionate reductase; Tartronate semialdehyde reductase; TSAR; EC 1.1.1.60 from Escherichia coli
YhaE / b3125: tartronate semialdehyde reductase (EC 1.1.1.60) from Escherichia coli
garR / P0ABQ2: tartronate semialdehyde reductase (EC 1.1.1.60) from Escherichia coli

26% id,
64% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory