Curated BLAST for Genomes

 

Curated BLAST

Searching in Streptococcus oralis subsp. dentisani 7747 CECT 7747 (GCF_000382825.1)

Found 9 curated entries in PaperBLAST's database that match '1.2.1.18' as complete word(s).

These curated entries have 9 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Streptococcus oralis subsp. dentisani 7747 CECT 7747, or try another query

HK29_RS05075 WP_038806127.1: NADP-dependent glyceraldehyde-3-phosphate dehydrogenase
is similar to:
PaperBLAST

PS417_10925: malonate-semialdehyde dehydrogenase (acetylating) (EC 1.2.1.18) from Pseudomonas simiae

34% id,
96% cov

mmsA / P42412: (methyl)malonate-semialdehyde dehydrogenase monomer (EC 1.2.1.27; EC 1.2.1.18) from Bacillus subtilis

31% id,
97% cov

dddC / C8YX90: malonate-semialdehyde dehydrogenase (acetylating) (EC 1.2.1.18) from Halomonas sp.

33% id,
87% cov

More...

adhE HK29_RS00450 WP_038805738.1: bifunctional acetaldehyde-CoA/alcohol dehydrogenase
is similar to:
PaperBLAST

PS417_10925: malonate-semialdehyde dehydrogenase (acetylating) (EC 1.2.1.18) from Pseudomonas simiae

21% id,
90% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory