Curated BLAST for Genomes

 

Curated BLAST

Searching in Methylovulum miyakonense HT12 (GCF_000384075.1)

Found 105 curated entries in PaperBLAST's database that match '1.2.1.3' as complete word(s).

These curated entries have 88 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Methylovulum miyakonense HT12, or try another query

METMI_RS25445 WP_019866236.1: aldehyde dehydrogenase family protein
is similar to:
PaperBLAST

AL3B2_MOUSE / E9Q3E1: Aldehyde dehydrogenase family 3 member B2; Aldehyde dehydrogenase 8; EC 1.2.1.3 from Mus musculus

43% id,
96% cov

AL3B2_HUMAN / P48448: Aldehyde dehydrogenase family 3 member B2; Aldehyde dehydrogenase 8; EC 1.2.1.3 from Homo sapiens

40% id,
97% cov

Q3UNF5: aldehyde dehydrogenase (NAD+) (EC 1.2.1.3) from Mus musculus

39% id,
99% cov

More...

METMI_RS0113630 WP_232215226.1: aldehyde dehydrogenase family protein
is similar to:
PaperBLAST

geoB / H1ZV37: geranial dehydrogenase (EC 1.2.1.3; EC 1.2.1.86) from Castellaniella defragrans

32% id,
95% cov

ALDH_PSEOL / P12693: Aldehyde dehydrogenase; EC 1.2.1.3 from Pseudomonas oleovorans
alkH / P12693: aldehyde dehydrogenase (EC 1.2.1.3) from Pseudomonas oleovorans

32% id,
95% cov

AL3B2_HUMAN / P48448: Aldehyde dehydrogenase family 3 member B2; Aldehyde dehydrogenase 8; EC 1.2.1.3 from Homo sapiens

32% id,
93% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory