Curated BLAST for Genomes

 

Curated BLAST

Searching in Methylovulum miyakonense HT12 (GCF_000384075.1)

Found 28 curated entries in PaperBLAST's database that match '2.5.1.54' as complete word(s).

These curated entries have 22 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Methylovulum miyakonense HT12, or try another query

aroG METMI_RS0101835 WP_019864486.1: 3-deoxy-7-phosphoheptulonate synthase AroG
is similar to:
PaperBLAST

AroG / b0754: 3-deoxy-7-phosphoheptulonate synthase, Phe-sensitive (EC 2.5.1.54) from Escherichia coli
aroG / P0AB91: 3-deoxy-7-phosphoheptulonate synthase, Phe-sensitive (EC 2.5.1.54) from Escherichia coli
C3TIE2: 3-deoxy-7-phosphoheptulonate synthase (EC 2.5.1.54) from Escherichia coli

66% id,
99% cov

Q9K169: 3-deoxy-7-phosphoheptulonate synthase (EC 2.5.1.54) from Neisseria meningitidis

60% id,
99% cov

AMT16_ALTAL / C9K7C8: Phospho-2-dehydro-3-deoxyheptonate aldolase AMT16; AM-toxin biosynthesis protein 16; EC 2.5.1.54 from Alternaria alternata

55% id,
94% cov

More...

kdsA METMI_RS0122430 WP_019868545.1: 3-deoxy-8-phosphooctulonate synthase
is similar to:
PaperBLAST

A0A482F152: 3-deoxy-7-phosphoheptulonate synthase (EC 2.5.1.54) from uncultured bacterium

30% id,
92% cov

Q9YEJ7: 3-deoxy-7-phosphoheptulonate synthase (EC 2.5.1.54) from Aeropyrum pernix

32% id,
79% cov

Q9WYH8: 3-deoxy-7-phosphoheptulonate synthase (EC 2.5.1.54) from Thermotoga maritima

32% id,
70% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory