Curated BLAST for Genomes

 

Curated BLAST

Searching in Methylovulum miyakonense HT12 (GCF_000384075.1)

Found 60 curated entries in PaperBLAST's database that match '2.7.2.4' as complete word(s).

These curated entries have 37 distinct sequences.

Running ublast with E ≤ 0.01

Found 6 relevant proteins in Methylovulum miyakonense HT12, or try another query

METMI_RS0121545 WP_019868370.1: aspartate kinase
is similar to:
PaperBLAST

O69077: aspartate kinase (EC 2.7.2.4) from Pseudomonas aeruginosa

75% id,
98% cov

AK_PSEPK / Q88EI9: Aspartate kinase; Aspartokinase; EC 2.7.2.4 from Pseudomonas putida

74% id,
98% cov

AKLYS_STUS1 / A4VJB4: Aspartate kinase Ask_LysC; Aspartokinase; EC 2.7.2.4 from Stutzerimonas stutzeri

74% id,
98% cov

More...

METMI_RS0115420 WP_019867196.1: homoserine dehydrogenase
is similar to:
PaperBLAST

Q9WZ17: homoserine dehydrogenase (EC 1.1.1.3); aspartate kinase (EC 2.7.2.4) from Thermotoga maritima

35% id,
56% cov

Echvi_2000: aspartate kinase / homoserine dehydrogenase (EC 2.7.2.4; EC 1.1.1.3) from Echinicola vietnamensis

25% id,
43% cov

CA265_RS23475: aspartate kinase; homoserine dehydrogenase (EC 2.7.2.4; EC 1.1.1.3) from Pedobacter sp.

24% id,
43% cov

More...

lysA METMI_RS0112590 WP_019866655.1: diaminopimelate decarboxylase
is similar to:
PaperBLAST

N515DRAFT_4002: aspartate kinase / diaminopimelate decarboxylase (EC 4.1.1.20; EC 2.7.2.4) from Dyella japonica

31% id,
42% cov

proB METMI_RS0109195 WP_019865989.1: glutamate 5-kinase
is similar to:
PaperBLAST

AK_THETH / P61489: Aspartokinase; Aspartate kinase; AK; ASK; Threonine-sensitive AK; ThrA; EC 2.7.2.4 from Thermus thermophilus
P61489: aspartate kinase (EC 2.7.2.4) from Thermus thermophilus

25% id,
50% cov

AK_THET2 / P61488: Aspartokinase; Aspartate kinase; ASK; EC 2.7.2.4 from Thermus thermophilus

25% id,
50% cov

AK_CORFL / P41398: Aspartokinase; Aspartate kinase; EC 2.7.2.4 from Corynebacterium flavescens
lysC / GB|AAA23293.1: aspartate kinase; EC 2.7.2.4 from Corynebacterium flavescens

25% id,
48% cov

More...

METMI_RS0108725 WP_019865897.1: pyridoxal-dependent decarboxylase, exosortase A system-associated
is similar to:
PaperBLAST

N515DRAFT_4002: aspartate kinase / diaminopimelate decarboxylase (EC 4.1.1.20; EC 2.7.2.4) from Dyella japonica

29% id,
42% cov

pyrH METMI_RS0108925 WP_019865935.1: UMP kinase
is similar to:
PaperBLAST

Q57991: aspartate kinase (EC 2.7.2.4) from Methanocaldococcus jannaschii

28% id,
22% cov

AKH1_ARATH / Q9SA18: Bifunctional aspartokinase/homoserine dehydrogenase 1, chloroplastic; AK-HD 1; AK-HSDH 1; Beta-aspartyl phosphate homoserine 1; EC 2.7.2.4; EC 1.1.1.3 from Arabidopsis thaliana

32% id,
18% cov

AKH2_ARATH / O81852: Bifunctional aspartokinase/homoserine dehydrogenase 2, chloroplastic; AK-HD 2; AK-HSDH 2; Beta-aspartyl phosphate homoserine 2; EC 2.7.2.4; EC 1.1.1.3 from Arabidopsis thaliana

29% id,
16% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 6 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory