Curated BLAST for Genomes

 

Curated BLAST

Searching in Methylovulum miyakonense HT12 (GCF_000384075.1)

Found 11 curated entries in PaperBLAST's database that match '3.1.1.17' as complete word(s).

These curated entries have 6 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Methylovulum miyakonense HT12, or try another query

METMI_RS0116720 WP_019867448.1: SMP-30/gluconolactonase/LRE family protein
is similar to:
PaperBLAST

GNL_ZYMMO / Q01578: Gluconolactonase; D-glucono-delta-lactone lactonohydrolase; EC 3.1.1.17 from Zymomonas mobilis
gnl / Q01578: gluconolactonase subunit (EC 3.1.1.17) from Zymomonas mobilis
Q01578: gluconolactonase (EC 3.1.1.17) from Zymomonas mobilis

28% id,
86% cov

METMI_RS0100335 WP_019864161.1: bifunctional YncE family protein/alkaline phosphatase family protein
is similar to:
PaperBLAST

GNL_ZYMMO / Q01578: Gluconolactonase; D-glucono-delta-lactone lactonohydrolase; EC 3.1.1.17 from Zymomonas mobilis
gnl / Q01578: gluconolactonase subunit (EC 3.1.1.17) from Zymomonas mobilis
Q01578: gluconolactonase (EC 3.1.1.17) from Zymomonas mobilis

29% id,
40% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Did not find any hits to reading frames.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory