Curated BLAST

Curated BLAST for Genomes

Curated BLAST

Searching in Hydrogenovibrio halophilus DSM 15072 (GCF_000384235.1)

Found 32 curated entries in PaperBLAST's database that match '2.7.1.71' as complete word(s).

These curated entries have 17 distinct sequences.

Running ublast with E ≤ 0.01

Found 4 relevant proteins in Hydrogenovibrio halophilus DSM 15072, or try another query

aroK A377_RS0105760 WP_028485305.1: shikimate kinase AroK is similar to:	PaperBLAST
AROK_ECOLI / P0A6D7: Shikimate kinase 1; SK 1; Shikimate kinase I; SKI; EC 2.7.1.71 from Escherichia coli AroK / b3390: shikimate kinase 1 (EC 2.7.1.71) from Escherichia coli aroK / P0A6D7: shikimate kinase 1 (EC 2.7.1.71) from Escherichia coli P0A6D7: shikimate kinase (EC 2.7.1.71) from Escherichia coli	51% id, 97% cov
A0A0M3KL09: shikimate kinase (EC 2.7.1.71) from Acinetobacter baumannii	52% id, 92% cov
AROK_MYCTU / P9WPY3: Shikimate kinase; SK; EC 2.7.1.71 from Mycobacterium tuberculosis P9WPY3: shikimate kinase (EC 2.7.1.71) from Mycobacterium tuberculosis	42% id, 91% cov
AROL_DICCH / P10880: Shikimate kinase 2; SK 2; Shikimate kinase II; SKII; EC 2.7.1.71 from Dickeya chrysanthemi	38% id, 96% cov
AROL_ECOLI / P0A6E1: Shikimate kinase 2; SK 2; Shikimate kinase II; SKII; EC 2.7.1.71 from Escherichia coli AroL / b0388: shikimate kinase 2 (EC 2.7.1.71) from Escherichia coli aroL / P0A6E1: shikimate kinase 2 (EC 2.7.1.71) from Escherichia coli	37% id, 97% cov
CCNA_03103: shikimate kinase (EC 2.7.1.71) from Caulobacter crescentus	38% id, 84% cov
Q6GGG1: shikimate kinase (EC 2.7.1.71) from Staphylococcus aureus	28% id, 95% cov
SK2_ARATH / Q8GY88: Shikimate kinase 2, chloroplastic; AtSK2; EC 2.7.1.71 from Arabidopsis thaliana SK2 / Q8GY88: shikimate kinase (EC 2.7.1.71) from Arabidopsis thaliana Q8GY88: shikimate kinase (EC 2.7.1.71) from Arabidopsis thaliana	34% id, 61% cov
SK1_ARATH / Q9SJ05: Shikimate kinase 1, chloroplastic; AtSK1; EC 2.7.1.71 from Arabidopsis thaliana SK1 / Q9SJ05: shikimate kinase (EC 2.7.1.71) from Arabidopsis thaliana	34% id, 60% cov
SK3_ORYSJ / Q7X7H9: Shikimate kinase 3, chloroplastic; OsSK3; EC 2.7.1.71 from Oryza sativa Q7X7H9: shikimate kinase (EC 2.7.1.71) from Oryza sativa	34% id, 57% cov
SK2_ORYSJ / Q5NTH3: Shikimate kinase 2, chloroplastic; OsSK2; EC 2.7.1.71 from Oryza sativa Q5NTH3: shikimate kinase (EC 2.7.1.71) from Oryza sativa	37% id, 53% cov
SK1_ORYSJ / Q5NTH4: Shikimate kinase 1, chloroplastic; OsSK1; EC 2.7.1.71 from Oryza sativa Q5NTH4: shikimate kinase (EC 2.7.1.71) from Oryza sativa	36% id, 54% cov
SK_SOLLC / Q00497: Shikimate kinase, chloroplastic; EC 2.7.1.71 from Solanum lycopersicum	40% id, 47% cov
More...

lon A377_RS0100175 WP_019894027.1: endopeptidase La is similar to:	PaperBLAST
A0A0M3KL09: shikimate kinase (EC 2.7.1.71) from Acinetobacter baumannii	36% id, 36% cov
SK1_ORYSJ / Q5NTH4: Shikimate kinase 1, chloroplastic; OsSK1; EC 2.7.1.71 from Oryza sativa Q5NTH4: shikimate kinase (EC 2.7.1.71) from Oryza sativa	25% id, 41% cov
AROK_ECOLI / P0A6D7: Shikimate kinase 1; SK 1; Shikimate kinase I; SKI; EC 2.7.1.71 from Escherichia coli AroK / b3390: shikimate kinase 1 (EC 2.7.1.71) from Escherichia coli aroK / P0A6D7: shikimate kinase 1 (EC 2.7.1.71) from Escherichia coli P0A6D7: shikimate kinase (EC 2.7.1.71) from Escherichia coli	52% id, 16% cov
SK2_ARATH / Q8GY88: Shikimate kinase 2, chloroplastic; AtSK2; EC 2.7.1.71 from Arabidopsis thaliana SK2 / Q8GY88: shikimate kinase (EC 2.7.1.71) from Arabidopsis thaliana Q8GY88: shikimate kinase (EC 2.7.1.71) from Arabidopsis thaliana	34% id, 22% cov
SK_SOLLC / Q00497: Shikimate kinase, chloroplastic; EC 2.7.1.71 from Solanum lycopersicum	30% id, 24% cov
SK2_ORYSJ / Q5NTH3: Shikimate kinase 2, chloroplastic; OsSK2; EC 2.7.1.71 from Oryza sativa Q5NTH3: shikimate kinase (EC 2.7.1.71) from Oryza sativa	36% id, 19% cov
More...

aroB A377_RS0105765 WP_019895269.1: 3-dehydroquinate synthase is similar to:	PaperBLAST
ARO1_EMENI / P07547: Pentafunctional AROM polypeptide; EC 4.2.3.4; EC 2.5.1.19; EC 2.7.1.71; EC 4.2.1.10; EC 1.1.1.25 from Emericella nidulans aromA: pentafunctional AROM polypeptide; EC 1.1.1.25; EC 2.5.1.19; EC 2.7.1.71; EC 4.2.1.10; EC 4.2.3.4 from Emericella nidulans	39% id, 22% cov
ARO1_YEAST / P08566: Pentafunctional AROM polypeptide; EC 4.2.3.4; EC 2.5.1.19; EC 2.7.1.71; EC 4.2.1.10; EC 1.1.1.25 from Saccharomyces cerevisiae ARO1 / P08566: pentafunctional AROM polypeptide (EC 4.2.3.4; EC 1.1.1.25; EC 2.7.1.71; EC 2.5.1.19; EC 4.2.1.10) from Saccharomyces cerevisiae	38% id, 13% cov
ARO1_YEAST / P08566: Pentafunctional AROM polypeptide; EC 4.2.3.4; EC 2.5.1.19; EC 2.7.1.71; EC 4.2.1.10; EC 1.1.1.25 from Saccharomyces cerevisiae ARO1 / P08566: pentafunctional AROM polypeptide (EC 4.2.3.4; EC 1.1.1.25; EC 2.7.1.71; EC 2.5.1.19; EC 4.2.1.10) from Saccharomyces cerevisiae	35% id, 9% cov

aroA A377_RS13215 WP_019896322.1: 3-phosphoshikimate 1-carboxyvinyltransferase is similar to:	PaperBLAST
ARO1_EMENI / P07547: Pentafunctional AROM polypeptide; EC 4.2.3.4; EC 2.5.1.19; EC 2.7.1.71; EC 4.2.1.10; EC 1.1.1.25 from Emericella nidulans aromA: pentafunctional AROM polypeptide; EC 1.1.1.25; EC 2.5.1.19; EC 2.7.1.71; EC 4.2.1.10; EC 4.2.3.4 from Emericella nidulans	27% id, 29% cov
ARO1_YEAST / P08566: Pentafunctional AROM polypeptide; EC 4.2.3.4; EC 2.5.1.19; EC 2.7.1.71; EC 4.2.1.10; EC 1.1.1.25 from Saccharomyces cerevisiae ARO1 / P08566: pentafunctional AROM polypeptide (EC 4.2.3.4; EC 1.1.1.25; EC 2.7.1.71; EC 2.5.1.19; EC 4.2.1.10) from Saccharomyces cerevisiae	26% id, 29% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 4 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory