Curated BLAST for Genomes

 

Curated BLAST

Searching in Methyloferula stellata AR4 AR4T (GCF_000385335.1)

Found 8 curated entries in PaperBLAST's database that match '1.3.1.13' as complete word(s).

These curated entries have 7 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Methyloferula stellata AR4 AR4T, or try another query

A3OQ_RS0119975 WP_020177221.1: prephenate/arogenate dehydrogenase family protein
is similar to:
PaperBLAST

A0A101IGG2: prephenate dehydrogenase (NADP+) (EC 1.3.1.13) from Methanothrix harundinacea

24% id,
84% cov

A8AAX2: prephenate dehydrogenase (NADP+) (EC 1.3.1.13) from Ignicoccus hospitalis

23% id,
58% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory