Curated BLAST for Genomes

 

Curated BLAST

Searching in Methyloferula stellata AR4 AR4T (GCF_000385335.1)

Found 51 curated entries in PaperBLAST's database that match '3.1.3.3' as complete word(s).

These curated entries have 38 distinct sequences.

Running ublast with E ≤ 0.01

Found 9 relevant proteins in Methyloferula stellata AR4 AR4T, or try another query

serB A3OQ_RS0109180 WP_020175090.1: phosphoserine phosphatase SerB
is similar to:
PaperBLAST

SERB_METJA / Q58989: Phosphoserine phosphatase; PSP; PSPase; O-phosphoserine phosphohydrolase; EC 3.1.3.3 from Methanocaldococcus jannaschii
Q58989: phosphoserine phosphatase (EC 3.1.3.3) from Methanocaldococcus jannaschii

41% id,
99% cov

SERB_ALBFT / Q21YU0: Phosphoserine phosphatase; PSP; PSPase; O-phosphoserine phosphohydrolase; EC 3.1.3.3 from Albidiferax ferrireducens

37% id,
99% cov

SERB_CAMJD / A7H590: Phosphoserine phosphatase; PSP; PSPase; O-phosphoserine phosphohydrolase; EC 3.1.3.3 from Campylobacter jejuni

37% id,
98% cov

More...

A3OQ_RS0105365 WP_020174340.1: 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase
is similar to:
PaperBLAST

PSPA_HYDTT / D3DFG8: Phosphoserine phosphatase 1; PSP 1; PSPase 1; Metal-independent phosphoserine phosphatase 1; iPSP1; O-phosphoserine phosphohydrolase 1; EC 3.1.3.3 from Hydrogenobacter thermophilus
D3DFG8: phosphoserine phosphatase (EC 3.1.3.3) from Hydrogenobacter thermophilus

29% id,
75% cov

A3OQ_RS23250 WP_020177375.1: PP2C family protein-serine/threonine phosphatase
is similar to:
PaperBLAST

RSBU_BACSU / P40399: Phosphoserine phosphatase RsbU; Sigma factor SigB regulation protein RsbU; EC 3.1.3.3 from Bacillus subtilis
P40399: phosphoserine phosphatase (EC 3.1.3.3) from Bacillus subtilis

29% id,
64% cov

A3OQ_RS0118310 WP_020176886.1: histidine phosphatase family protein
is similar to:
PaperBLAST

PSPB_HYDTT / D3DFP8: Putative phosphoserine phosphatase 2; PSP 2; PSPase 2; Metal-independent phosphoserine phosphatase 2; iPSP2; O-phosphoserine phosphohydrolase 2; EC 3.1.3.3 from Hydrogenobacter thermophilus
D3DFP8: phosphoserine phosphatase (EC 3.1.3.3) from Hydrogenobacter thermophilus

34% id,
44% cov

A3OQ_RS0102580 WP_020173790.1: D-2-hydroxyacid dehydrogenase
is similar to:
PaperBLAST

Echvi_2777: fused D-3-phosphoglycerate dehydrogenase / phosphoserine phosphatase (EC 1.1.1.95; EC 3.1.3.3) from Echinicola vietnamensis

32% id,
46% cov

A3OQ_RS0120470 WP_026596066.1: Cof-type HAD-IIB family hydrolase
is similar to:
PaperBLAST

SERB_CAMJD / A7H590: Phosphoserine phosphatase; PSP; PSPase; O-phosphoserine phosphohydrolase; EC 3.1.3.3 from Campylobacter jejuni

31% id,
46% cov

SERB_METJA / Q58989: Phosphoserine phosphatase; PSP; PSPase; O-phosphoserine phosphohydrolase; EC 3.1.3.3 from Methanocaldococcus jannaschii
Q58989: phosphoserine phosphatase (EC 3.1.3.3) from Methanocaldococcus jannaschii

37% id,
25% cov

A3OQ_RS0108770 WP_020175010.1: cation-translocating P-type ATPase
is similar to:
PaperBLAST

SERB_ALBFT / Q21YU0: Phosphoserine phosphatase; PSP; PSPase; O-phosphoserine phosphohydrolase; EC 3.1.3.3 from Albidiferax ferrireducens

27% id,
51% cov

A3OQ_RS0116535 WP_020176531.1: phosphonate dehydrogenase
is similar to:
PaperBLAST

Echvi_2777: fused D-3-phosphoglycerate dehydrogenase / phosphoserine phosphatase (EC 1.1.1.95; EC 3.1.3.3) from Echinicola vietnamensis

27% id,
44% cov

A3OQ_RS0106350 WP_020174531.1: D-glycerate dehydrogenase
is similar to:
PaperBLAST

Echvi_2777: fused D-3-phosphoglycerate dehydrogenase / phosphoserine phosphatase (EC 1.1.1.95; EC 3.1.3.3) from Echinicola vietnamensis

27% id,
42% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 8 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory