Curated BLAST for Genomes

 

Curated BLAST

Searching in Methyloferula stellata AR4 AR4T (GCF_000385335.1)

Found 33 curated entries in PaperBLAST's database that match '4.2.1.51' as complete word(s).

These curated entries have 27 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Methyloferula stellata AR4 AR4T, or try another query

A3OQ_RS0104410 WP_020174149.1: prephenate dehydratase
is similar to:
PaperBLAST

Q5NLV8: prephenate dehydratase (EC 4.2.1.51) from Zymomonas mobilis

48% id,
84% cov

Q8DUV6: prephenate dehydratase (EC 4.2.1.51) from Streptococcus mutans

31% id,
99% cov

CA265_RS11630: prephenate and/or arogenate dehydratase (EC 4.2.1.51) from Pedobacter sp.

30% id,
97% cov

More...

A3OQ_RS0114235 WP_051116043.1: transporter substrate-binding domain-containing protein
is similar to:
PaperBLAST

PHEC_PSEAE / Q01269: Cyclohexadienyl dehydratase; EC 4.2.1.51; EC 4.2.1.91 from Pseudomonas aeruginosa

44% id,
82% cov

A3OQ_RS0102620 WP_020173798.1: transporter substrate-binding domain-containing protein
is similar to:
PaperBLAST

PHEC_PSEAE / Q01269: Cyclohexadienyl dehydratase; EC 4.2.1.51; EC 4.2.1.91 from Pseudomonas aeruginosa

24% id,
65% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory