Curated BLAST for Genomes

 

Curated BLAST

Searching in Methyloferula stellata AR4 AR4T (GCF_000385335.1)

Found 17 curated entries in PaperBLAST's database that match '5.2.1.2' as complete word(s).

These curated entries have 12 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Methyloferula stellata AR4 AR4T, or try another query

A3OQ_RS0117490 WP_020176726.1: glutathione S-transferase family protein
is similar to:
PaperBLAST

Ac3H11_2306: Maleylacetoacetate isomerase (EC 5.2.1.2) from Acidovorax sp.

25% id,
100% cov

MAAI_RAT / P57113: Maleylacetoacetate isomerase; MAAI; GSTZ1-1; Glutathione S-transferase zeta 1; EC 5.2.1.2; EC 2.5.1.18 from Rattus norvegicus

25% id,
91% cov

MAAI_HUMAN / O43708: Maleylacetoacetate isomerase; MAAI; GSTZ1-1; Glutathione S-transferase zeta 1; EC 5.2.1.2; EC 2.5.1.18 from Homo sapiens
GSTZ1 / O43708: maleylacetoacetate isomerase/glutathione transferase ζ monomer (EC 2.5.1.18; EC 5.2.1.2) from Homo sapiens
O43708: glutathione transferase (EC 2.5.1.18); maleylacetoacetate isomerase (EC 5.2.1.2) from Homo sapiens

26% id,
58% cov

More...

A3OQ_RS0107085 WP_020174675.1: glutathione S-transferase N-terminal domain-containing protein
is similar to:
PaperBLAST

Pf6N2E2_5292: Maleylacetoacetate isomerase (EC 5.2.1.2) from Pseudomonas fluorescens

28% id,
89% cov

AO353_15560: Maleylacetoacetate isomerase (EC 5.2.1.2) from Pseudomonas fluorescens

26% id,
72% cov

AO356_16835: Maleylacetoacetate isomerase (EC 5.2.1.2) from Pseudomonas fluorescens

32% id,
38% cov

A3OQ_RS0119770 WP_040581545.1: glutathione S-transferase family protein
is similar to:
PaperBLAST

MAAI2_DROME / Q9VHD2: Probable maleylacetoacetate isomerase 2; MAAI 2; Glutathione S-transferase zeta 2; EC 5.2.1.2; EC 2.5.1.18 from Drosophila melanogaster

25% id,
82% cov

AO356_16835: Maleylacetoacetate isomerase (EC 5.2.1.2) from Pseudomonas fluorescens

22% id,
91% cov

Pf6N2E2_5292: Maleylacetoacetate isomerase (EC 5.2.1.2) from Pseudomonas fluorescens

21% id,
88% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

3581021-3581680 (frame -3) on NZ_ARWA01000001.1 Methyloferula stellata AR4 strain AR4T A3OQDRAFT_chromosome1.1_C, whole genome shotgun sequence
is similar to:
PaperBLAST

MAAI2_DROME / Q9VHD2: Probable maleylacetoacetate isomerase 2; MAAI 2; Glutathione S-transferase zeta 2; EC 5.2.1.2; EC 2.5.1.18 from Drosophila melanogaster
Also see hits to annotated proteins above

25% id,
87% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory